Archive BacDiveID:10.13145/bacdive6466.20230509.8.1

Strain identifier

BacDive ID: 6466

Type strain:

Species: Lactobacillus gasseri

Strain Designation: AM 63

Strain history: CIP <- 1987, DSMZ <- O. Kandler <- F. Gasser: strain AM 63

NCBI tax ID(s): 324831 (strain), 1596 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 8654

BacDive-ID: 6466

DSM-Number: 20243

keywords: genome sequence, 16S sequence, Bacteria, anaerobe, mesophilic, human pathogen

description: Lactobacillus gasseri AM 63 is an anaerobe, mesophilic human pathogen that was isolated from human.

NCBI tax id

NCBI tax id	Matching level
324831	strain
1596	species

strain history

@ref	history
8654	<- F. Gasser, AM 63 (Lactobacillus acidophilus)
67770	DSM 20243 <-- F. Gasser AM63 (Lactobacillus acidophilus).
119540	CIP <- 1987, DSMZ <- O. Kandler <- F. Gasser: strain AM 63

doi: 10.13145/bacdive6466.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/bacillota
domain: Bacteria
phylum: Bacillota
class: Bacilli
order: Lactobacillales
family: Lactobacillaceae
genus: Lactobacillus
species: Lactobacillus gasseri
full scientific name: Lactobacillus gasseri Lauer and Kandler 1980

@ref: 8654

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Lactobacillaceae

genus: Lactobacillus

species: Lactobacillus gasseri

full scientific name: Lactobacillus gasseri Lauer and Kandler 1980

strain designation: AM 63

type strain: yes

Morphology

cell morphology

@ref	motility	confidence	gram stain	cell shape
69480	no	92.743
69480		100	positive
119540	no		positive	rod-shaped

Culture and growth conditions

culture medium

@ref	name	growth	link	composition
8654	MRS MEDIUM WITH CYSTEINE (DSMZ Medium 232)	yes	https://mediadive.dsmz.de/medium/232	Name: MRS MEDIUM WITH CYSTEINE (DSMZ Medium 232) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)2 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water
40500	MEDIUM 40- for Lactobacillus and Leuconostoc	yes		Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g)
119540	CIP Medium 40	yes	https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=40

culture temp

@ref	growth	type	temperature	range
8654	positive	growth	37	mesophilic
40500	positive	growth	37	mesophilic
50606	positive	growth	37	mesophilic
67770	positive	growth	37	mesophilic
119540	positive	growth	37-45
119540	no	growth	15	psychrophilic

Physiology and metabolism

oxygen tolerance

@ref	oxygen tolerance
8654	anaerobe
50606	microaerophile
119540	facultative anaerobe

spore formation

@ref	spore formation	confidence
69481	no	100
69480	no	99.954

murein

@ref: 8654
murein short key: A11.31
type: A4alpha L-Lys-D-Asp

metabolite utilization

@ref	metabolite	utilization activity	kind of utilization tested	Chebi-ID
68371	Potassium 5-ketogluconate	-	builds acid from
68371	Potassium 2-ketogluconate	-	builds acid from
68371	gluconate	-	builds acid from	24265
68371	L-arabitol	-	builds acid from	18403
68371	D-arabitol	-	builds acid from	18333
68371	L-fucose	-	builds acid from	18287
68371	D-fucose	-	builds acid from	28847
68371	D-tagatose	+	builds acid from	16443
68371	D-lyxose	-	builds acid from	62318
68371	turanose	-	builds acid from	32528
68371	xylitol	-	builds acid from	17151
68371	glycogen	-	builds acid from	28087
68371	raffinose	-	builds acid from	16634
68371	melezitose	-	builds acid from	6731
68371	inulin	-	builds acid from	15443
68371	trehalose	+	builds acid from	27082
68371	sucrose	+	builds acid from	17992
68371	melibiose	-	builds acid from	28053
68371	lactose	+	builds acid from	17716
68371	maltose	+	builds acid from	17306
68371	cellobiose	+	builds acid from	17057
68371	salicin	+	builds acid from	17814
68371	esculin	+	builds acid from	4853
68371	arbutin	+	builds acid from	18305
68371	amygdalin	+	builds acid from	27613
68371	N-acetylglucosamine	+	builds acid from	59640
68371	methyl alpha-D-glucopyranoside	-	builds acid from	320061
68371	methyl alpha-D-mannoside	-	builds acid from	43943
68371	D-sorbitol	-	builds acid from	17924
68371	D-mannitol	-	builds acid from	16899
68371	myo-inositol	-	builds acid from	17268
68371	galactitol	-	builds acid from	16813
68371	L-rhamnose	-	builds acid from	62345
68371	L-sorbose	-	builds acid from	17266
68371	D-mannose	+	builds acid from	16024
68371	D-fructose	+	builds acid from	15824
68371	D-glucose	+	builds acid from	17634
68371	D-galactose	+	builds acid from	12936
68371	methyl beta-D-xylopyranoside	-	builds acid from	74863
68371	ribitol	-	builds acid from	15963
68371	L-xylose	-	builds acid from	65328
68371	D-xylose	-	builds acid from	65327
68371	D-ribose	-	builds acid from	16988
68371	L-arabinose	-	builds acid from	30849
68371	D-arabinose	-	builds acid from	17108
68371	erythritol	-	builds acid from	17113
68371	glycerol	-	builds acid from	17754
119540	nitrate	-	reduction	17632
119540	nitrite	-	reduction	16301
119540	nitrate	+	respiration	17632

metabolite tests

@ref: 119540
Chebi-ID: 15688
metabolite: acetoin
voges-proskauer-test: -

enzymes

@ref	value	activity	ec
68382	alpha-fucosidase	-	3.2.1.51
68382	alpha-mannosidase	-	3.2.1.24
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52
68382	beta-glucosidase	+	3.2.1.21
68382	alpha-glucosidase	-	3.2.1.20
68382	beta-glucuronidase	-	3.2.1.31
68382	beta-galactosidase	-	3.2.1.23
68382	alpha-galactosidase	-	3.2.1.22
68382	naphthol-AS-BI-phosphohydrolase	+
68382	acid phosphatase	-	3.1.3.2
68382	alpha-chymotrypsin	-	3.4.21.1
68382	trypsin	-	3.4.21.4
68382	cystine arylamidase	-	3.4.11.3
68382	valine arylamidase	-
68382	leucine arylamidase	-	3.4.11.1
68382	lipase (C 14)	-
68382	esterase lipase (C 8)	-
68382	esterase (C 4)	-
68382	alkaline phosphatase	-	3.1.3.1
119540	oxidase	-
119540	alcohol dehydrogenase	-	1.1.1.1
119540	catalase	-	1.11.1.6
119540	lysine decarboxylase	-	4.1.1.18
119540	ornithine decarboxylase	-	4.1.1.17

API zym

@ref	Control	Alkaline phosphatase	Esterase	Esterase Lipase	Lipase	Leucine arylamidase	Valine arylamidase	Cystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
119540	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	+	+	-	-

API 50CHac

@ref	Q	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
8654	-	-	-	-	-	-	-	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	+	+	+	+	+	+	+	+	-	+	+	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-
8654	-	-	-	-	-	-	-	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	+	+	+	+	+	+	+	+	-	+	+	-	-	-	+	-	-	+	-	-	+	-	-	-	-	-	-	-
8654	-	-	-	-	-	-	-	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	+	+	+	+	+	+	+	+	-	+	+	-	-	-	+	-	-	+	-	-	+	-	-	-	-	-	-	-
8654	-	-	-	-	-	-	-	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	+	+	+	+	+	+	+	+	-	+	+	-	-	-	+	-	-	+	-	-	+	-	-	-	-	-	-	-
119540		-	-	-	-	-	-	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	+	+	+	+	+	+	+	+	-	+	+	-	-	-	+/-	-	-	+	-	-	+	-	-	-	-	-	-	-

Isolation, sampling and environmental information

isolation

@ref	sample type
8654	human
67770	Human intestine
119540	Human, Vaginal tract

isolation source categories

Cat1: #Host
Cat2: #Human

taxonmaps

@ref: 69479
File name: preview.99_840.png
url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_46;96_506;97_581;98_668;99_840&stattab=map
Last taxonomy: Lactobacillus
16S sequence: AF519171
Sequence Identity:
Total samples: 185237
soil counts: 4782
aquatic counts: 5652
animal counts: 173268
plant counts: 1535

Safety information

risk assessment

@ref	pathogenicity human	biosafety level	biosafety level comment
8654	yes, in single cases	1	Risk group (German classification)
119540		1	Risk group (French classification)

Sequence information

16S sequences

@ref	description	accession	length	database	NCBI tax ID
20218	Lactobacillus gasseri 16S-23S rRNA intergenic spacer region	AF074859	216	ena	324831
20218	Lactobacillus gasseri strain ATCC 33323 16S ribosomal RNA gene, complete sequence	AF519171	1747	ena	324831
20218	Lactobacillus gasseri partial 16S rRNA gene, type strain CIP 102991T	HE573914	1529	ena	1596
20218	Lactobacillus gasseri gene for 16S rRNA, partial sequence, strain: YIT 0192 (= DSM 20243)	AB008209	1566	ena	1596
20218	Lactobacillus gasseri strain DSM 20243 16S ribosomal RNA gene, partial sequence	EF468096	395	ena	324831
20218	Lactobacillus gasseri 16S ribosomal RNA	M58820	1521	ena	1596
20218	Lactobacillus gasseri gene for 16S rRNA, partial sequence, strain: JCM 1131	AB289134	676	ena	1596
20218	L.gasseri 16S rRNA gene	X61137	1350	ena	324831
67770	Lactobacillus gasseri gene for 16S ribosomal RNA, partial sequence, strain: JCM 1131	LC064892	1508	ena	1596

Genome sequences

@ref	description	accession	assembly level	database	NCBI tax ID
66792	Lactobacillus gasseri ATCC 33323 = JCM 1131	GCA_000014425	complete	ncbi	324831
66792	Lactobacillus gasseri ATCC 33323	324831.13	complete	patric	324831
66792	Lactobacillus gasseri ATCC 33323 = JCM 1131	324831.46	wgs	patric	324831
66792	Lactobacillus gasseri JCM 1131	1236546.3	wgs	patric	324831
66792	Lactobacillus gasseri strain NCTC13722	1596.110	wgs	patric	1596
66792	Lactobacillus gasseri JCM 1131	2585427878	draft	img	324831
66792	Lactobacillus gasseri ATCC 33323	639633030	complete	img	324831
67770	Lactobacillus gasseri ATCC 33323 = JCM 1131	GCA_000615125	contig	ncbi	324831
67770	Lactobacillus gasseri NCTC13722	GCA_900452355	contig	ncbi	1596
67770	Lactobacillus gasseri ATCC 33323 = JCM 1131	GCA_008868295	contig	ncbi	324831
66792	Lactobacillus gasseri ATCC 33323 = JCM 1131 DSM 20243	GCA_029823575	contig	ncbi	324831

GC content

@ref	GC-content	method
8654	34.0
67770	34
67770	35.3	genome sequence analysis

Genome-based predictions

predictions

trait	prediction	confidence	training_data
spore-forming	no	100	no
motile	no	96.116	no
flagellated	no	97.869	no
gram-positive	yes	96.105	no
anaerobic	no	58.481	no
halophile	yes	87.754	no
spore-forming	no	96.276	no
thermophile	no	99.469	no
glucose-util	yes	92.803	no
aerobic	no	97.843	yes
glucose-ferment	yes	91.077	no

External links

@ref: 8654

culture collection no.: CCUG 31451, DSM 20243, ATCC 33323, NCDO 2233, NCIB 11718, JCM 1131, BCC 49728, BCRC 14619, CCM 7009, CECT 4479, CGMCC 1.3396, CIP 102991, KCTC 3163, LMG 9203, NCFB 2233, NCIMB 11718, NCTC 13722, NRIC 1546, NRRL B-14168, NRRL B-4240, VTT E-991245, PCM 2500

straininfo link

@ref	straininfo
75938	7309
75939	312265

literature

topic	Pubmed-ID	title	authors	journal	DOI	year	mesh	topic2
Enzymology	8071209	Isolation of a novel IS3 group insertion element and construction of an integration vector for Lactobacillus spp.	Walker DC, Klaenhammer TR	J Bacteriol	10.1128/jb.176.17.5330-5340.1994	1994	Amino Acid Sequence, Bacterial Proteins/biosynthesis/chemistry, Base Sequence, Blotting, Southern, Chromosomes, Bacterial/chemistry, Cloning, Molecular, Conjugation, Genetic, DNA Transposable Elements, DNA, Bacterial/chemistry/genetics/isolation & purification, Electroporation, Escherichia coli, Escherichia coli Proteins, Genetic Vectors, Lactobacillus/genetics, Molecular Sequence Data, Nucleic Acid Conformation, Plasmids/isolation & purification/metabolism, Restriction Mapping, Sequence Homology, Amino Acid	Phylogeny
Metabolism	8076807	Expression of mRNA encoding IFN alpha in macrophages stimulated with Lactobacillus gasseri.	Kitazawa H, Tomioka Y, Matsumura K, Aso H, Mizugaki M, Itoh T, Yamaguchi T	FEMS Microbiol Lett	10.1111/j.1574-6968.1994.tb07052.x	1994	Animals, Base Sequence, Cells, Cultured, DNA Primers, Interferon-alpha/biosynthesis/genetics, Lactobacillus/immunology, Macrophages/immunology/metabolism, Mice, Mice, Inbred BALB C, Mice, Inbred C57BL, Molecular Sequence Data, Peyer's Patches/cytology, RNA, Messenger/genetics/metabolism, Spleen/cytology	Genetics
Enzymology	10857549	UV-induced Lactobacillus gasseri mutants resisting sodium chloride and sodium nitrite for meat fermentation.	Arihara K, Itoh M	Int J Food Microbiol	10.1016/s0168-1605(99)00206-8	2000	Animals, Electrophoresis, Polyacrylamide Gel, Fermentation, Humans, Lactobacillus/genetics/radiation effects, Meat Products/microbiology, Mutation, Sodium Chloride/pharmacology, Sodium Nitrite/pharmacology, Swine, Ultraviolet Rays	Pathogenicity
Metabolism	11393684	AT oligonucleotides inducing B lymphocyte activation exist in probiotic Lactobacillus gasseri.	Kitazawa H, Ueha S, Itoh S, Watanabe H, Konno K, Kawai Y, Saito T, Itoh T, Yamaguchi T	Int J Food Microbiol	10.1016/s0168-1605(00)00500-6	2001	Animals, B-Lymphocytes/cytology/immunology/metabolism, Base Sequence, DNA, Bacterial/analysis/chemistry, Gene Amplification, Lactobacillus/genetics/immunology, Lymphocyte Activation, Male, Mice, Mice, Inbred BALB C, Mice, Inbred C57BL, Molecular Sequence Data, Oligonucleotides/genetics/metabolism/pharmacology, Polymerase Chain Reaction, *Probiotics, Sequence Homology, Nucleic Acid, Specific Pathogen-Free Organisms	Genetics
Pathogenicity	12076036	A novel immunostimulating aspect of Lactobacillus gasseri: induction of "Gasserokine" as chemoattractants for macrophages.	Kitazawa H, Ino T, Kawai Y, Itoh T, Saito T	Int J Food Microbiol	10.1016/s0168-1605(02)00045-4	2002	Animals, Chemotactic Factors/analysis/isolation & purification, Chromatography, High Pressure Liquid, Chromatography, Ion Exchange, Humans, Lactobacillus/immunology, Lactobacillus acidophilus/immunology, Macrophages/*immunology, Male, Mice, Mice, Inbred C57BL, Monocytes/immunology, Probiotics, Specific Pathogen-Free Organisms	Enzymology
Enzymology	12373759	Pulsed-field gel electrophoretic analysis of the genome of Lactobacillus gasseri ATCC33323, and construction of a physical map.	Abs El-Osta YG, Hillier AJ, Davidson BE, Dobos M	Electrophoresis	10.1002/1522-2683(200210)23:19<3321::AID-ELPS3321>3.0.CO;2-G	2002	DNA Restriction Enzymes/metabolism, Electrophoresis, Gel, Pulsed-Field/methods, Genetic Linkage, Genome, Bacterial, Lactobacillus/genetics, Molecular Weight, Operon/genetics, Physical Chromosome Mapping/methods, Replication Origin/genetics	Genetics
Enzymology	15454317	Characterization of lytic enzyme activities of Lactobacillus gasseri with special reference to autolysis.	Yokoi KJ, Kawasaki K, Taketo A, Kodaira K	Int J Food Microbiol	10.1016/j.ijfoodmicro.2004.03.021	2004	Bacteriolysis/drug effects/physiology, Culture Media, Dose-Response Relationship, Drug, Hydrogen-Ion Concentration, Lactobacillus/drug effects/enzymology/radiation effects, Molecular Weight, Probiotics, Sodium Chloride/*pharmacology, Ultraviolet Rays	Pathogenicity
Enzymology	15533265	Lactobacillus gasseri: effects on mouse intestinal flora enzyme activity and isoflavonoids in the caecum and plasma.	Tamura M, Ohnishi-Kameyama M, Shinohara K	Br J Nutr	10.1079/bjn20041267	2004	Animals, Body Weight/physiology, Cecum/enzymology/metabolism/microbiology, Colony Count, Microbial/methods, Eating/physiology, Equol, Isoflavones/analysis/blood, Lactobacillus/*physiology, Male, Mice, Mice, Inbred ICR, Phytoestrogens/blood	Metabolism
Enzymology	15808364	Molecular properties of the two-component cell lysis system encoded by prophage phigaY of Lactobacillus gasseri JCM 1131T: cloning, sequencing, and expression in Escherichia coli.	Yokoi KJ, Shinohara M, Kawahigashi N, Nakagawa K, Kawasaki K, Nakamura S, Taketo A, Kodaira K	Int J Food Microbiol	10.1016/j.ijfoodmicro.2004.08.021	2005	Amino Acid Sequence, Bacterial Proteins/analysis/genetics, Bacteriophages/physiology, Base Sequence, Cloning, Molecular, DNA, Bacterial/analysis, Escherichia coli/genetics, Fermentation, Gene Expression Regulation, Bacterial, Gene Expression Regulation, Enzymologic, Lactobacillus/enzymology/genetics/virology, Lysogeny/genetics, Molecular Sequence Data, N-Acetylmuramoyl-L-alanine Amidase/genetics/metabolism, Plasmids, Probiotics, Prophages/*physiology, Restriction Mapping, Sequence Analysis, DNA	Genetics
Enzymology	16198511	Enzymatic characterization of a maltogenic amylase from Lactobacillus gasseri ATCC 33323 expressed in Escherichia coli.	Oh KW, Kim MJ, Kim HY, Kim BY, Baik MY, Auh JH, Park CS	FEMS Microbiol Lett	10.1016/j.femsle.2005.08.050	2005	Cloning, Molecular, Escherichia coli/enzymology/genetics, Glycoside Hydrolases/chemistry/genetics/isolation & purification/metabolism, Hydrolysis, Lactobacillus/*enzymology/genetics, Maltose/metabolism, Recombinant Proteins/chemistry/genetics/isolation & purification/metabolism, Substrate Specificity	Metabolism
	16348621	High-Frequency Plasmid Transduction by Lactobacillus gasseri Bacteriophage phiadh.	Raya RR, Klaenhammer TR	Appl Environ Microbiol	10.1128/aem.58.1.187-193.1992	1992
Pathogenicity	16469059	Strong immunostimulatory activity of AT-oligodeoxynucleotide requires a six-base loop with a self-stabilized 5'-C...G-3' stem structure.	Shimosato T, Kimura T, Tohno M, Iliev ID, Katoh S, Ito Y, Kawai Y, Sasaki T, Saito T, Kitazawa H	Cell Microbiol	10.1111/j.1462-5822.2005.00640.x	2006	AT Rich Sequence/immunology, Animals, Base Sequence, CHO Cells, Cricetinae, Humans, Intestines/cytology/immunology, Lactobacillus/chemistry/immunology, Leukocytes, Mononuclear/immunology, Molecular Sequence Data, Oligodeoxyribonucleotides/chemistry/immunology, Peyer's Patches/cytology/immunology, *Probiotics, Swine, Toll-Like Receptor 9/genetics, Transfection	Genetics
Genetics	16672450	Comparative genomics and transcriptional analysis of prophages identified in the genomes of Lactobacillus gasseri, Lactobacillus salivarius, and Lactobacillus casei.	Ventura M, Canchaya C, Bernini V, Altermann E, Barrangou R, McGrath S, Claesson MJ, Li Y, Leahy S, Walker CD, Zink R, Neviani E, Steele J, Broadbent J, Klaenhammer TR, Fitzgerald GF, O'toole PW, van Sinderen D	Appl Environ Microbiol	10.1128/AEM.72.5.3130-3146.2006	2006	Animals, Base Sequence, Genome, Bacterial, Genome, Viral, Genomics, Humans, Lactobacillus/genetics/virology, Lactobacillus casei/virology, Molecular Sequence Data, Phylogeny, Prophages/classification/genetics/isolation & purification/metabolism, Sequence Analysis, DNA, Siphoviridae/classification/genetics/isolation & purification/metabolism, *Transcription, Genetic, Viral Proteins/genetics/metabolism	Phylogeny
Genetics	17920212	Mutational and biochemical analyses of the endolysin Lys(gaY) encoded by the Lactobacillus gasseri JCM 1131T phage phi gaY.	Sugahara K, Yokoi KJ, Nakamura Y, Nishino T, Yamakawa A, Taketo A, Kodaira K	Gene	10.1016/j.gene.2007.08.023	2007	Amino Acid Sequence, Bacillus Phages/enzymology/genetics, DNA Mutational Analysis, Endopeptidases/chemistry/genetics/metabolism, Lactobacillus/virology, Molecular Sequence Data, Protein Structure, Tertiary	Enzymology
Metabolism	18062231	Extracellular secretion of a maltogenic amylase from Lactobacillus gasseri ATCC33323 in Lactococcus lactis MG1363 and its application on the production of branched maltooligosaccharides.	Cho MH, Park SE, Lee MH, Ha SJ, Kim HY, Kim MJ, Lee SJ, Madsen SM, Park CS	J Microbiol Biotechnol		2007	Amylases/chemistry/genetics/metabolism, Cloning, Molecular, Gene Expression Regulation, Bacterial, Hydrogen-Ion Concentration, Lactobacillus/enzymology/genetics, Lactococcus lactis/genetics/metabolism, Maltose/metabolism, Oligosaccharides/biosynthesis, Recombinant Proteins/chemistry/genetics/isolation & purification/metabolism, Temperature	Enzymology
Metabolism	18240137	ClpL is essential for induction of thermotolerance and is potentially part of the HrcA regulon in Lactobacillus gasseri.	Suokko A, Poutanen M, Savijoki K, Kalkkinen N, Varmanen P	Proteomics	10.1002/pmic.200700925	2008	Bacterial Proteins/metabolism, Base Sequence, DNA-Binding Proteins/metabolism, Electrophoresis, Gel, Two-Dimensional, Electrophoretic Mobility Shift Assay, Endopeptidase Clp/genetics, Gene Expression Regulation, Bacterial, Heat-Shock Response, Lactobacillus/genetics/physiology, Molecular Sequence Data, Promoter Regions, Genetic, Regulon, Repressor Proteins/metabolism	Enzymology
Cultivation	18411284	Inhibition of Neisseria gonorrhoeae epithelial cell interactions by vaginal Lactobacillus species.	Spurbeck RR, Arvidson CG	Infect Immun	10.1128/IAI.00101-08	2008	Antibiosis, Bacterial Adhesion, Cell Line, Coculture Techniques, Culture Media, Endometrium/cytology/microbiology, Epithelial Cells/microbiology, Female, Humans, Hydrogen Peroxide/metabolism, Lactobacillus/classification/growth & development/metabolism, Neisseria gonorrhoeae/growth & development/pathogenicity/physiology, Vagina/microbiology	Pathogenicity
Genetics	18539810	Analysis of the genome sequence of Lactobacillus gasseri ATCC 33323 reveals the molecular basis of an autochthonous intestinal organism.	Azcarate-Peril MA, Altermann E, Goh YJ, Tallon R, Sanozky-Dawes RB, Pfeiler EA, O'Flaherty S, Buck BL, Dobson A, Duong T, Miller MJ, Barrangou R, Klaenhammer TR	Appl Environ Microbiol	10.1128/AEM.00054-08	2008	Adult, Bacterial Adhesion/genetics/physiology, Bacterial Proteins/genetics, Child, DNA Primers, Gastrointestinal Tract/microbiology, Genes, Bacterial, Genome, Bacterial, Humans, Infant, Newborn, Intestines/microbiology, Lactobacillus/genetics/isolation & purification/pathogenicity, Open Reading Frames	Pathogenicity
Enzymology	18603798	Identification of five phospho-beta-glycosidases from Lactobacillus gasseri ATCC33323T cultured in lactose medium.	Nagaoka S, Honda H, Ohshima S, Kawai Y, Kitazawa H, Tateno Y, Yamazaki Y, Saito T	Biosci Biotechnol Biochem	10.1271/bbb.80089	2008	Chromatography, Gene Expression/drug effects, Glucose/pharmacology, Lactobacillus/enzymology/metabolism, Lactose/pharmacology, Microbiological Techniques, Phosphoproteins/isolation & purification, beta-Galactosidase/*isolation & purification	Phylogeny
Enzymology	19114506	DNA sequencing and homologous expression of a small peptide conferring immunity to gassericin A, a circular bacteriocin produced by Lactobacillus gasseri LA39.	Kawai Y, Kusnadi J, Kemperman R, Kok J, Ito Y, Endo M, Arakawa K, Uchida H, Nishimura J, Kitazawa H, Saito T	Appl Environ Microbiol	10.1128/AEM.02485-08	2008	Amino Acid Sequence, Anti-Bacterial Agents/antagonists & inhibitors/pharmacology, Bacterial Proteins/genetics/metabolism, Bacteriocins/antagonists & inhibitors/pharmacology, Cloning, Molecular, DNA, Bacterial/chemistry/genetics, Drug Resistance, Bacterial, Gene Order, Lactobacillus/*drug effects/genetics, Metabolic Networks and Pathways, Molecular Sequence Data, Open Reading Frames, Sequence Analysis, DNA, Sequence Homology, Amino Acid	Genetics
Pathogenicity	19296164	Characterization of temperate Lactobacillus gasseri phage LgaI and its impact as prophage on autolysis of its lysogenic host strains.	Ismail EA, Neve H, Geis A, Heller KJ	Curr Microbiol	10.1007/s00284-009-9384-0	2009	Bacteriolysis, Bacteriophages/physiology/ultrastructure, Host-Pathogen Interactions, Lactobacillus/physiology/virology, Lysogeny, Prophages/physiology/ultrastructure
Enzymology	19666732	Conjugative plasmid from Lactobacillus gasseri LA39 that carries genes for production of and immunity to the circular bacteriocin gassericin A.	Ito Y, Kawai Y, Arakawa K, Honme Y, Sasaki T, Saito T	Appl Environ Microbiol	10.1128/AEM.00195-09	2009	Anti-Bacterial Agents/biosynthesis, Bacteriocins/biosynthesis/genetics, Cloning, Molecular, Conjugation, Genetic, DNA, Bacterial/chemistry/genetics, Drug Resistance, Bacterial, Gene Order, Genes, Bacterial, Lactobacillus/drug effects/genetics, Molecular Sequence Data, Open Reading Frames, *Plasmids, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Transformation, Bacterial	Genetics
Metabolism	19903951	Immunomodulation in gut-associated lymphoid tissue of neonatal chicks by immunobiotic diets.	Sato K, Takahashi K, Tohno M, Miura Y, Kamada T, Ikegami S, Kitazawa H	Poult Sci	10.3382/ps.2009-00291	2009	Animal Feed, Animal Nutritional Physiological Phenomena, Animals, Animals, Newborn, B-Lymphocytes/physiology, Bursa of Fabricius/physiology, Chickens, Cytokines/genetics/metabolism, Diet/veterinary, Gene Expression Regulation/physiology, Immunomodulation/drug effects, Lactobacillus, Lymphoid Tissue/*physiology, Male, RNA, Messenger/metabolism, T-Lymphocytes/physiology, Toll-Like Receptors/genetics/metabolism	Pathogenicity
Enzymology	20075040	Inulin and levan synthesis by probiotic Lactobacillus gasseri strains: characterization of three novel fructansucrase enzymes and their fructan products.	Anwar MA, Kralj S, Pique AV, Leemhuis H, van der Maarel MJEC, Dijkhuizen L	Microbiology (Reading)	10.1099/mic.0.036616-0	2010	Bacterial Proteins/chemistry/genetics/metabolism, Cloning, Molecular, Fructans/metabolism, Glycoside Hydrolases/chemistry/genetics/metabolism, Inulin/metabolism, Kinetics, Lactobacillus/chemistry/enzymology/genetics/metabolism, Molecular Sequence Data, Probiotics/*metabolism, Substrate Specificity	Metabolism
Metabolism	20226062	The PTS transporters of Lactobacillus gasseri ATCC 33323.	Francl AL, Thongaram T, Miller MJ	BMC Microbiol	10.1186/1471-2180-10-77	2010	Carbohydrate Metabolism, Cell Proliferation, Computational Biology, Gene Expression Profiling, Gene Silencing, Genetic Variation, Lactobacillus/genetics/metabolism, Mutagenesis, Insertional, Phosphoenolpyruvate Sugar Phosphotransferase System/genetics/metabolism, Polymerase Chain Reaction
Phylogeny	20849602	Characterization of a novel Lactobacillus species closely related to Lactobacillus johnsonii using a combination of molecular and comparative genomics methods.	Sarmiento-Rubiano LA, Berger B, Moine D, Zuniga M, Perez-Martinez G, Yebra MJ	BMC Genomics	10.1186/1471-2164-11-504	2010	Animals, Bacterial Proteins/genetics/metabolism, Comparative Genomic Hybridization/methods, Conserved Sequence/genetics, DNA, Bacterial/genetics, Electrophoresis, Polyacrylamide Gel, Gene Expression Regulation, Bacterial, Genetic Loci/genetics, Genome, Bacterial/genetics, Genomics/methods, Lactobacillus/genetics/isolation & purification, Nucleic Acid Hybridization, Oligonucleotide Array Sequence Analysis, Phenotype, *Phylogeny, RNA, Ribosomal, 16S/genetics, Rats, Reproducibility of Results, Sequence Analysis, DNA, Species Specificity	Genetics
	21484153	Group-specific comparison of four lactobacilli isolated from human sources using differential blast analysis.	Altermann E, Klaenhammer TR	Genes Nutr	10.1007/s12263-010-0191-9	2010
Metabolism	22282520	Identification of lactose phosphotransferase systems in Lactobacillus gasseri ATCC 33323 required for lactose utilization.	Francl AL, Hoeflinger JL, Miller MJ	Microbiology (Reading)	10.1099/mic.0.052928-0	2012	Bacterial Proteins/genetics/metabolism, Computational Biology, Culture Media/metabolism, Gene Expression Regulation, Bacterial, Gene Knockout Techniques, Genes, Bacterial, Lactobacillus/enzymology/genetics/growth & development, Lactose/metabolism, Phosphoenolpyruvate Sugar Phosphotransferase System/genetics/metabolism, Transcriptome	Transcriptome
Enzymology	22449746	Purification and characterization of two phospho-beta-galactosidases, LacG1 and LacG2, from Lactobacillus gasseri ATCC33323(T).	Honda H, Nagaoka S, Kawai Y, Kemperman R, Kok J, Yamazaki Y, Tateno Y, Kitazawa H, Saito T	J Gen Appl Microbiol	10.2323/jgam.58.11	2012	Bacterial Proteins/chemistry/genetics/isolation & purification, Base Sequence, Catalytic Domain, Cluster Analysis, Culture Media/chemistry, Electrophoresis, Polyacrylamide Gel, Enzyme Activation, Enzyme Assays, Gene Expression Regulation, Bacterial, Gene Expression Regulation, Enzymologic, Glycoside Hydrolases/chemistry/classification/genetics/isolation & purification, Kinetics, Lactobacillus/enzymology/genetics, Lactose/chemistry, Nitrophenylgalactosides/chemical synthesis/chemistry, Phylogeny, Recombinant Proteins/chemistry/genetics, Substrate Specificity	Phylogeny
Metabolism	23503311	Characterization of a Lactobacillus gasseri JCM 1131T lipoteichoic acid with a novel glycolipid anchor structure.	Shiraishi T, Yokota S, Morita N, Fukiya S, Tomita S, Tanaka N, Okada S, Yokota A	Appl Environ Microbiol	10.1128/AEM.00243-13	2013	Alanine/chemistry, Amino Acid Substitution, Cell Membrane/chemistry, Fatty Acids/chemistry, Glycerol/metabolism, Glycerophosphates/chemistry, Glycolipids/chemistry, Hexoses/chemistry, Lactobacillus/chemistry/genetics, Lipopolysaccharides/chemistry, Teichoic Acids/chemistry
Phylogeny	24478214	Lactobacillus rodentium sp. nov., from the digestive tract of wild rodents.	Killer J, Havlik J, Vlkova E, Rada V, Pechar R, Benada O, Kopecny J, Kofronova O, Sechovcova H	Int J Syst Evol Microbiol	10.1099/ijs.0.054924-0	2014	Animals, Bacterial Typing Techniques, Base Composition, Czech Republic, DNA, Bacterial/genetics, Fatty Acids/chemistry, Fermentation, Genes, Bacterial, Intestine, Small/microbiology, Lactobacillus/classification/genetics/isolation & purification, Mice/microbiology, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan/chemistry, Phylogeny, RNA, Ribosomal, 16S/genetics, Rectum/microbiology, Sequence Analysis, DNA	Genetics
Pathogenicity	24492360	Sustained delivery of commensal bacteria from pod-intravaginal rings.	Gunawardana M, Mullen M, Yoo J, Webster P, Moss JA, Baum MM	Antimicrob Agents Chemother	10.1128/AAC.02542-13	2014	Administration, Intravaginal, Delayed-Action Preparations, Drug Delivery Systems/methods, Female, Humans, Lactobacillus/physiology, Probiotics/administration & dosage, Vagina/microbiology
Enzymology	24682298	Spontaneously induced prophages in Lactobacillus gasseri contribute to horizontal gene transfer.	Baugher JL, Durmaz E, Klaenhammer TR	Appl Environ Microbiol	10.1128/AEM.04092-13	2014	Bacteriophages/genetics/isolation & purification/physiology, DNA, Viral/chemistry/genetics, Gene Transfer, Horizontal, Host Specificity, Lactobacillus/virology, Molecular Sequence Data, Plasmids, Prophages/genetics/isolation & purification/physiology, Sequence Analysis, DNA, Transduction, Genetic, *Virus Activation	Phylogeny
Metabolism	24837903	Development of an integration mutagenesis system in Lactobacillus gasseri.	Selle K, Goh YJ, O'Flaherty S, Klaenhammer TR	Gut Microbes	10.4161/gmic.29101	2014	Bacterial Adhesion, Cell Line, Epithelial Cells/microbiology, Gene Deletion, Genetics, Microbial/methods, Humans, Lactobacillus/genetics/physiology, Lipopolysaccharides/metabolism, Mutagenesis, Insertional/methods, Selection, Genetic, Teichoic Acids/metabolism, Transferases (Other Substituted Phosphate Groups)/genetics/metabolism	Pathogenicity
Metabolism	25500495	Sortase-deficient lactobacilli: effect on immunomodulation and gut retention.	Call EK, Goh YJ, Selle K, Klaenhammer TR, O'Flaherty S	Microbiology (Reading)	10.1099/mic.0.000007	2014	Aminoacyltransferases/genetics/immunology/metabolism, Animals, Bacterial Adhesion, Bacterial Proteins/genetics/immunology/metabolism, Caco-2 Cells, Cysteine Endopeptidases/genetics/immunology/metabolism, Dendritic Cells/immunology/microbiology, Gastrointestinal Tract/immunology/microbiology, Humans, Immunomodulation, Lactobacillus/enzymology/genetics/growth & development/physiology, Lactobacillus acidophilus/enzymology/genetics/growth & development/*physiology, Mice, Swine, Tumor Necrosis Factor-alpha/immunology	Pathogenicity
Metabolism	25529420	Lactobacillus gasseri requires peptides, not proteins or free amino acids, for growth in milk.	Arakawa K, Matsunaga K, Takihiro S, Moritoki A, Ryuto S, Kawai Y, Masuda T, Miyamoto T	J Dairy Sci	10.3168/jds.2014-8860	2014	Amino Acids/metabolism, Animals, Caseins/metabolism, Cattle, Chymotrypsin/metabolism, Gastrointestinal Tract/microbiology, Lactobacillus/growth & development, Milk/chemistry/microbiology, Nitrogen/chemistry, Pepsin A/metabolism, Peptide Fragments/metabolism, Peptide Hydrolases/metabolism, Peptides/*metabolism, Probiotics/metabolism
Metabolism	25884980	Lactobacillus gasseri SBT2055 suppresses fatty acid release through enlargement of fat emulsion size in vitro and promotes fecal fat excretion in healthy Japanese subjects.	Ogawa A, Kobayashi T, Sakai F, Kadooka Y, Kawasaki Y	Lipids Health Dis	10.1186/s12944-015-0019-0	2015	Adult, Aged, Double-Blind Method, Emulsions/metabolism, Fats/analysis/metabolism, Fatty Acids/metabolism, Feces/chemistry, Female, Humans, Hymecromone/analogs & derivatives/metabolism, Japan, Lactobacillus/metabolism, Lipase/metabolism, Male, Middle Aged, Particle Size	Pathogenicity
Metabolism	25917402	A Moonlighting Enolase from Lactobacillus gasseri does not Require Enzymatic Activity to Inhibit Neisseria gonorrhoeae Adherence to Epithelial Cells.	Spurbeck RR, Harris PT, Raghunathan K, Arvidson DN, Arvidson CG	Probiotics Antimicrob Proteins	10.1007/s12602-015-9192-8	2015	Bacterial Adhesion, Bacterial Proteins/genetics/metabolism, Cell Line, Tumor, Cells, Cultured, Epithelial Cells/microbiology, Gonorrhea/therapy, Humans, Lactobacillus/enzymology/genetics, Membrane Proteins/genetics/metabolism, Mutagenesis, Insertional, Neisseria gonorrhoeae/growth & development, Phosphopyruvate Hydratase/genetics/*metabolism, RNA, Bacterial/genetics, Sequence Analysis, RNA	Pathogenicity
Pathogenicity	27904056	Prophylactic Effect of Lactobacillus pentosus strain S-PT84 on Candida Infection and Gastric Inflammation in a Murine Gastrointestinal Candidiasis Model.	Maekawa T, Ishijima AS, Ida M, Izumo T, Ono Y, Shibata H, Abe S	Med Mycol J	10.3314/mmj.16-00012	2016	Administration, Oral, Animals, Antibiosis, Candida albicans/growth & development, Candidiasis/prevention & control, Capillary Permeability, Disease Models, Animal, Female, Gastrointestinal Diseases/prevention & control, Inflammation/prevention & control, Lactobacillus pentosus, Mice, Inbred ICR, Neutrophil Infiltration, Probiotics/administration & dosage, Severity of Illness Index, Stomach/microbiology
Pathogenicity	27904074	Prophylactic Effect of Lactobacillus pentosus strain S-PT84 on Candida Infection and Gastric Inflammation in a Murine Gastrointestinal Candidiasis Model [Errata].	Maekawa T, Ishijima AS, Ida M, Izumo T, Ono Y, Shibata H, Abe S	Med Mycol J	10.3314/mmj.16-00012E	2016	Administration, Oral, Animals, Antibiosis, Candida albicans/growth & development, Candidiasis/prevention & control, Capillary Permeability, Disease Models, Animal, Female, Gastrointestinal Diseases/prevention & control, Inflammation/prevention & control, Lactobacillus pentosus, Mice, Inbred ICR, Neutrophil Infiltration, Probiotics/administration & dosage, Severity of Illness Index, Stomach/microbiology
	29038772	Revealing the genomic differences between two subgroups in Lactobacillus gasseri.	Tada I, Tanizawa Y, Endo A, Tohno M, Arita M	Biosci Microbiota Food Health	10.12938/bmfh.17-006	2017
Metabolism	29633638	Lipoteichoic acids are embedded in cell walls during logarithmic phase, but exposed on membrane vesicles in Lactobacillus gasseri JCM 1131(T).	Shiraishi T, Yokota S, Sato Y, Ito T, Fukiya S, Yamamoto S, Sato T, Yokota A	Benef Microbes	10.3920/BM2017.0124	2018	Antibodies, Monoclonal/metabolism, Antigens, Surface/metabolism, Cell Membrane/chemistry/metabolism/ultrastructure, Cell Wall/chemistry/metabolism, Lactobacillus fermentum, Lactobacillus gasseri/chemistry/growth & development/physiology/ultrastructure, Lactobacillus rhamnosus, Lipopolysaccharides/metabolism, Probiotics, Protein Binding, Teichoic Acids/metabolism
Metabolism	29883797	The membrane phospholipid cardiolipin plays a pivotal role in bile acid adaptation by Lactobacillus gasseri JCM1131(T).	Kato S, Tobe H, Matsubara H, Sawada M, Sasaki Y, Fukiya S, Morita N, Yokota A	Biochim Biophys Acta Mol Cell Biol Lipids	10.1016/j.bbalip.2018.06.004	2018	Bile Acids and Salts/metabolism/physiology, Cardiolipins/metabolism/physiology, Cell Membrane/metabolism, Cholic Acid/metabolism, Glycolipids/metabolism/physiology, Lactobacillus gasseri/metabolism/physiology, Membrane Lipids/metabolism, Membrane Proteins/metabolism, Membranes/metabolism, Phosphatidylglycerols/metabolism, Phospholipids/metabolism, Transferases (Other Substituted Phosphate Groups)/metabolism	Lipids
Phylogeny	30226464	Lactobacillus paragasseri sp. nov., a sister taxon of Lactobacillus gasseri, based on whole-genome sequence analyses.	Tanizawa Y, Tada I, Kobayashi H, Endo A, Maeno S, Toyoda A, Arita M, Nakamura Y, Sakamoto M, Ohkuma M, Tohno M	Int J Syst Evol Microbiol	10.1099/ijsem.0.003020	2018	Bacterial Typing Techniques, DNA, Bacterial/genetics, DNA-Directed RNA Polymerases/genetics, Fatty Acids/chemistry, Genome, Bacterial, Lactobacillus/classification/genetics, Lactobacillus gasseri, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA	Genetics
	30842760	Lactobacillus gasseri APC 678 Reduces Shedding of the Pathogen Clostridium difficile in a Murine Model.	Quigley L, Coakley M, Alemayehu D, Rea MC, Casey PG, O'Sullivan O, Murphy E, Kiely B, Cotter PD, Hill C, Ross RP	Front Microbiol	10.3389/fmicb.2019.00273	2019
Metabolism	32656603	Metabolically engineered Lactobacillus gasseri JCM 1131 as a novel producer of optically pure L- and D-lactate.	Zunar B, Trontel A, Svetec Miklenic M, Prah JL, Stafa A, Mardetko N, Novak M, Santek B, Svetec IK	World J Microbiol Biotechnol	10.1007/s11274-020-02887-2	2020	Bacillus megaterium/genetics/metabolism, Culture Media/chemistry, Fermentation, Glucose/metabolism, Hydrolysis, L-Lactate Dehydrogenase/genetics/metabolism, Lactic Acid/metabolism, Lactobacillus gasseri/genetics/metabolism, Lignin/metabolism, Metabolic Engineering, Microorganisms, Genetically-Modified/genetics, Plasmids/genetics	Cultivation
Pathogenicity	33206342	Effects of a Potential Probiotic Strain Lactobacillus gasseri ATCC 33323 on Helicobacter pylori-Induced Inflammatory Response and Gene Expression in Coinfected Gastric Epithelial Cells.	Yarmohammadi M, Yadegar A, Ebrahimi MT, Zali MR	Probiotics Antimicrob Proteins	10.1007/s12602-020-09721-z	2020	Cell Line, Tumor, Coinfection, Epithelial Cells/microbiology, Gene Expression, Helicobacter pylori/pathogenicity, Humans, Integrins/genetics, Interleukin-8/genetics, Lactobacillus gasseri/physiology, *Probiotics, Proto-Oncogene Proteins c-bcl-2/genetics, RNA, Messenger, beta Catenin/genetics
Genetics	33397707	Portable CRISPR-Cas9(N) System for Flexible Genome Engineering in Lactobacillus acidophilus, Lactobacillus gasseri, and Lactobacillus paracasei.	Goh YJ, Barrangou R	Appl Environ Microbiol	10.1128/AEM.02669-20	2021	CRISPR-Associated Protein 9, CRISPR-Cas Systems, Deoxyribonuclease I, Gene Editing/methods, Genome, Bacterial, Lactobacillus acidophilus/genetics, Lactobacillus gasseri/genetics, Lactobacillus paracasei/*genetics	Biotechnology
	34066735	Identification of Bile Salt Hydrolase and Bile Salt Resistance in a Probiotic Bacterium Lactobacillus gasseri JCM1131(T).	Kusada H, Morinaga K, Tamaki H	Microorganisms	10.3390/microorganisms9051011	2021
Metabolism	34442669	Oligosaccharide Metabolism and Lipoteichoic Acid Production in Lactobacillus gasseri and Lactobacillus paragasseri.	Shiraishi T, Maeno S, Kishi S, Fujii T, Tanno H, Hirano K, Tochio T, Tanizawa Y, Arita M, Yokota SI, Endo A	Microorganisms	10.3390/microorganisms9081590	2021		Biotechnology
Phylogeny	34721319	Comparison of 16S rRNA Gene Based Microbial Profiling Using Five Next-Generation Sequencers and Various Primers.	Park C, Kim SB, Choi SH, Kim S	Front Microbiol	10.3389/fmicb.2021.715500	2021
Pathogenicity	34948426	Engineering of Vaginal Lactobacilli to Express Fluorescent Proteins Enables the Analysis of Their Mixture in Nanofibers.	Stojanov S, Plavec TV, Kristl J, Zupancic S, Berlec A	Int J Mol Sci	10.3390/ijms222413631	2021	Female, Green Fluorescent Proteins/genetics, Humans, Lactobacillus/genetics, Lactobacillus crispatus/genetics, Lactobacillus gasseri/genetics, Lactobacillus plantarum, Luminescent Proteins/genetics, Microorganisms, Genetically-Modified, Probiotics, Vagina/*microbiology	Biotechnology
	35796949	Goji Ferment Ameliorated Acetaminophen-Induced Liver Injury in vitro and in vivo.	Yang CM, Chien MY, Wang LY, Chuang CH, Chen CH	Probiotics Antimicrob Proteins	10.1007/s12602-022-09956-y	2022
Pathogenicity	35799214	Lactobacilli displacement and Candida albicans inhibition on initial adhesion assays: a probiotic analysis.	Rodriguez-Arias RJ, Guachi-Alvarez BO, Montalvo-Vivero DE, Machado A	BMC Res Notes	10.1186/s13104-022-06114-z	2022	Candida albicans, Candidiasis, Female, Humans, Lactobacillus/physiology, Probiotics/pharmacology, Vagina
Metabolism	36411410	Anti-Helicobacter pylori activity of potential probiotic Lactiplantibacillus pentosus SLC13.	Thuy TTD, Kuo PY, Lin SM, Kao CY	BMC Microbiol	10.1186/s12866-022-02701-z	2022	Humans, Helicobacter pylori/metabolism, Urease/metabolism, Interleukin-8/metabolism, Fatigue Syndrome, Chronic, Bacterial Adhesion, Helicobacter Infections/drug therapy, Probiotics/pharmacology/metabolism, Lactobacillus/physiology	Pathogenicity

Reference

@id	authors	catalogue	doi/url	title	journal	pubmed
8654	Curators of the DSMZ	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20243)	https://www.dsmz.de/collection/catalogue/details/culture/DSM-20243
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.		10.1099/ijsem.0.004332	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.		10.1016/j.syapm.2013.11.002	StrainInfo introduces electronic passports for microorganisms.	Syst Appl Microbiol. 37: 42-50 2014	24321274
40500	Curators of the CIP		https://brclims.pasteur.fr/brcWeb/souche/detail/1/14738
50606	Curators of the CCUG	Culture Collection University of Gothenburg (CCUG) (CCUG 31451)	https://www.ccug.se/strain?id=31451
66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann		https://diaspora-project.de/progress.html#genomes	Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
67770	Curators of the JCM		https://jcm.brc.riken.jp/en/
68371				Automatically annotated from API 50CH acid
68382				Automatically annotated from API zym
69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.		https://microbeatlas.org/	MicrobeAtlas 1.0 beta
69480	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann		https://diaspora-project.de/progress.html#genomes	Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69481	Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch		10.21203/rs.3.rs-2527258/v1	Predictions based on the model GenomeNet Sporulation v. 1
75938	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.		10.60712/SI-ID7309.1	StrainInfo: A central database for resolving microbial strain identifiers
75939	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.		10.60712/SI-ID312265.1	StrainInfo: A central database for resolving microbial strain identifiers
119540	Curators of the CIP	Collection of Institut Pasteur (CIP 102991)	https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20102991