Name: Mycobacterium triplex CCUG 58693
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 8511

Type strain:

Species: Mycobacterium triplex

Culture col. no.: CCUG 58693, DSMZ 44626, ATCC 70071, CDC 90-1019, CIP 106108, DSM 44626, ATCC 700071, JCM 14744

Strain history: CIP <- 1999, W.R. Butler, CDC, Atlanta, GA, USA: CDC 90-1019

NCBI tax ID(s): 47839 (species)

SI-ID 46211

ATCC 700071, CIP 106108, ATCC 70071, DSM 44626, JCM 14744, CCUG 58693

Other strains from Mycobacterium triplex

M. triplex CCUG 56061

Section

Mycobacterium triplex CCUG 58693 is an aerobe, mesophilic, rod-shaped bacterium that was isolated from lymph nodes.

rod-shaped
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Mycobacteriaceae*
	Genus	*Mycobacterium*
	Species	**Mycobacterium triplex**
	Full Scientific Name (LPSN)	Mycobacterium triplex Floyd et al. 1997

Information on morphological and physiological properties Morphology

[Ref.: #123584]	Cell shape	rod-shaped

[Ref.: #123584]	Motility	no

[Ref.: #61741]

Incubation period

10-14 days

Multimedia content

[Ref.: #11938]

Caption:

Medium 645 37°C

[Ref.: #11938]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #11938]

Culture medium

MIDDLEBROOK MEDIUM (DSMZ Medium 645)

[Ref.: #11938]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #11938]

Culture medium composition

expand / minimize

[Ref.: #123584]

Culture medium

CIP Medium 55

[Ref.: #123584]

Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #11938]		growth	37 °C
[Ref.: #61741]		growth	37 °C
[Ref.: #67770]		growth	37 °C
[Ref.: #123584]		growth	22-37 °C
[Ref.: #123584]	no	growth	10 °C
[Ref.: #123584]	no	growth	45 °C

[Ref.: #11938]	Temperature range	mesophilic
[Ref.: #61741]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #123584]	Temperature range	psychrophilic
[Ref.: #123584]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #61741]	Oxygen tolerance	aerobe
[Ref.: #123584]	Oxygen tolerance	obligate aerobe

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #123584]	hippurate ChEBI	-	hydrolysis
[Ref.: #123584]	nitrate ChEBI	+	reduction
[Ref.: #123584]	nitrate ChEBI	-	respiration
[Ref.: #123584]	nitrite ChEBI	-	reduction

	Metabolite production	Metabolite	Production
[Ref.: #123584]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #123584]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #123584]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #123584]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #123584]	gelatinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #123584]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #123584]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #123584]	9255	-	+	-	+	-	+	-	-	-	-	+	+	-	-	-	+	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #11938]	Sample type/isolated from	lymph nodes
[Ref.: #11938]	Geographic location (country and/or sea, region)	California
[Ref.: #11938]	Country	USA
[Ref.: #11938]	Country ISO 3 Code	USA
[Ref.: #11938]	Continent	North America

[Ref.: #61741]	Sample type/isolated from	Human lymf nodes
[Ref.: #61741]	Sampling date	1990
[Ref.: #61741]	Geographic location (country and/or sea, region)	California
[Ref.: #61741]	Country	USA
[Ref.: #61741]	Country ISO 3 Code	USA
[Ref.: #61741]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Lymph node
[Ref.: #67770]	Geographic location (country and/or sea, region)	CA
[Ref.: #67770]	Country	USA
[Ref.: #67770]	Country ISO 3 Code	USA
[Ref.: #67770]	Continent	North America

[Ref.: #123584]	Sample type/isolated from	Lymph nodes
[Ref.: #123584]	Geographic location (country and/or sea, region)	California
[Ref.: #123584]	Country	United States of America
[Ref.: #123584]	Country ISO 3 Code	USA
[Ref.: #123584]	Continent	North America
* marker position based on {}

Isolation sources categories

#Host Body-Site

#Organ

#Lymph node

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #11938]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #123584]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #11938]	Mycobacterium triplex strain ATCC 700071 16S ribosomal RNA gene, partial sequence	GQ153279	1483	ENA	47839 tax ID
[Ref.: #20218]	Mycobacterium triplex strain 90-1019 16S ribosomal RNA gene, complete sequence	U57632	1474	ENA	47839 tax ID	*
[Ref.: #20218]	Mycobacterium triplex strain CIP 106108 16S ribosomal RNA gene, partial sequence	AF547973	542	ENA	47839 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Mycobacterium triplex DSM 44626	GCA_000689255	scaffold	GenBank	47839 tax ID
[Ref.: #67770]	Mycobacterium triplex DSM 44626	GCA_002102415	contig	GenBank	47839 tax ID
[Ref.: #66792]	Mycobacterium triplex strain DSM 44626	47839.7	wgs	PATRIC	47839 tax ID	*
[Ref.: #66792]	Mycobacterium triplex strain DSM 44626	47839.3	wgs	PATRIC	47839 tax ID	*
[Ref.: #66792]	Mycobacterium triplex DSM 44626	2619619252	draft	JGI IMG/M	47839 tax ID	*

[Ref.: #67770]

GC-content

66.57 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mycobacterium triplex strain DSM 44626 PATRIC: 47839.7
[Ref.: #69480]	gram-positive	yes	89.659	no
[Ref.: #69480]	anaerobic	no	99.342	no
[Ref.: #69480]	halophile	no	95.918	no
[Ref.: #69480]	spore-forming	no	82.395	no
[Ref.: #69480]	glucose-util	yes	72.42	no
[Ref.: #69480]	aerobic	yes	93.039	yes
[Ref.: #69480]	flagellated	no	98.824	no
[Ref.: #69480]	motile	no	94.017	no
[Ref.: #69480]	thermophile	no	97.425	yes
[Ref.: #69480]	glucose-ferment	no	92.423	no

Availability in culture collections External links

[Ref.: #11938]

Culture collection no.

CCUG 58693, DSMZ 44626, ATCC 70071, CDC 90-1019, CIP 106108, DSM 44626, ATCC 700071, JCM 14744

[Ref.: #77901]

SI-ID 46211

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Draft Genome Sequence of Mycobacterium triplex DSM 44626.	Sassi M, Croce O, Robert C, Raoult D, Drancourt M	Genome Announc	10.1128/genomeA.00499-14	2014	*
Phylogeny	Characterization of an SAV organism and proposal of Mycobacterium triplex sp. nov.	Floyd MM, Guthertz LS, Silcox VA, Duffey PS, Jang Y, Desmond EP, Crawford JT, Butler WR	J Clin Microbiol	10.1128/jcm.34.12.2963-2967.1996	1996	*

References

#11938

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44626

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#61741 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 58693

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#77901

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID46211.1 )

#123584 Collection of Institut Pasteur ; Curators of the CIP; CIP 106108
* These data were automatically processed and therefore are not curated

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Mycobacterium triplex strain DSM 44626

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