[Ref.: #11690] |
Sample type/isolated from |
dead fish in aquarium |
[Ref.: #11690] |
Geographic location (country and/or sea, region) |
Philadelphia |
[Ref.: #11690] |
Country |
USA |
[Ref.: #11690] |
Country ISO 3 Code |
USA |
[Ref.: #11690] |
Continent |
North America |
[Ref.: #11690] |
Geographic location |
39.9500°/-75.1667° |
|
[Ref.: #67770] |
Sample type/isolated from |
Fish tuberculosis lesion |
[Ref.: #67770] |
Geographic location (country and/or sea, region) |
Philadelphia, PA |
[Ref.: #67770] |
Country |
USA |
[Ref.: #67770] |
Country ISO 3 Code |
USA |
[Ref.: #67770] |
Continent |
North America |
|
[Ref.: #120812] |
Sample type/isolated from |
Animal, Fish (salt water) |
[Ref.: #120812] |
Geographic location (country and/or sea, region) |
Philadelphia, Pennsylvania |
[Ref.: #120812] |
Country |
United States of America |
[Ref.: #120812] |
Country ISO 3 Code |
USA |
[Ref.: #120812] |
Continent |
North America |
* marker position based on {}
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Isolation sources categories |
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Information on genomic background e.g. entries in nucleic sequence databass Sequence information
|
16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #20218] |
Mycobacterium marinum gene for 16S ribosomal RNA, partial sequence, strain: ATCC 927 |
AB548717 |
1475 |
|
1781 tax ID |
* |
[Ref.: #20218] |
Mycobacterium marinum DNA, 16S-23S ribosomal RNA intergenic spacer, partial sequence, strain: ATCC 927 |
AB548718 |
272 |
|
1781 tax ID |
* |
[Ref.: #20218] |
Mycobacterium marinum gene for 16S ribosomal RNA, partial sequence |
AB636134 |
1483 |
|
1781 tax ID |
* |
[Ref.: #20218] |
Mycobacterium marinum strain ATCC 927 16S ribosomal RNA gene, partial sequence |
AF456240 |
1522 |
|
1781 tax ID |
* |
[Ref.: #20218] |
Mycobacterium marinum ATCC 927, 16S ribosomal RNA gene, partial sequence |
U92088 |
880 |
|
1781 tax ID |
* |
[Ref.: #20218] |
Mycobacterium marinum strain CIP 104528 16S ribosomal RNA gene, partial sequence |
AF547946 |
554 |
|
1781 tax ID |
* |
[Ref.: #20218] |
Mycobacterium marinum 16S rRNA gene |
AJ536032 |
1410 |
|
1781 tax ID |
* |
[Ref.: #20218] |
Mycobacterium marinum DNA for 16S rRNA, internal transcribed spacer, 23S rRNA |
AB026701 |
432 |
|
1781 tax ID |
* |
[Ref.: #20218] |
Mycobacterium marinum 16S ribosomal RNA gene, partial sequence |
AF271347 |
450 |
|
1781 tax ID |
* |
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Availability in culture collections External links
[Ref.: #11690] |
Culture collection no. |
DSM 44344, ATCC 927, NCIMB 1297, NCMB 1303, NCTC 2275, TMC 1218, JCM 17638, CCUG 20998, CCUG 27843, CECT 3024, CECT 7091, CIP 104528, IFM 10630, JCM 12275, NCMB 1476, DSM 43225 |
[Ref.: #77675] |
SI-ID 34648
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* |
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Literature: |
Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries. |
|
|
Title |
Authors |
Journal |
DOI |
Year |
|
Genetics |
Complete Genome Sequence of Mycobacterium marinum ATCC 927(T), Obtained Using Nanopore and Illumina Sequencing Technologies. |
Yoshida M, Fukano H, Miyamoto Y, Shibayama K, Suzuki M, Hoshino Y |
Genome Announc |
10.1128/genomeA.00397-18 |
2018 |
* |
Stress |
Husbandry stress exacerbates mycobacterial infections in adult zebrafish, Danio rerio (Hamilton). |
Ramsay JM, Watral V, Schreck CB, Kent ML |
J Fish Dis |
10.1111/j.1365-2761.2009.01074.x |
2009 |
* |
Enzymology |
Biochemical, molecular, and virulence characteristics of select Mycobacterium marinum isolates in hybrid striped bass Morone chrysops x M. saxatilis and zebrafish Danio rerio. |
Ostland VE, Watral V, Whipps CM, Austin FW, St-Hilaire S, Westerman ME, Kent ML |
Dis Aquat Organ |
10.3354/dao01891 |
2008 |
* |
Phylogeny |
Strain variation in Mycobacterium marinum fish isolates. |
Ucko M, Colorni A, Kvitt H, Diamant A, Zlotkin A, Knibb WR |
Appl Environ Microbiol |
10.1128/AEM.68.11.5281-5287.2002 |
2002 |
* |
Enzymology |
Studies on adenylate kinase (ATP:AMP phosphotransferase) of Mycobacterium marinum (ATCC 927). |
Batra PP, Takeda K, Kreye W |
Acta Leprol |
|
1989 |
* |
Enzymology |
Purification and characterization of ATP:AMP phosphotransferase from Mycobacterium marinum. |
Batra PP, Burnette B, Takeda K |
Biochim Biophys Acta |
10.1016/0167-4838(86)90075-0 |
1986 |
* |
|
Surface-Shaving Proteomics of Mycobacterium marinum Identifies Biofilm Subtype-Specific Changes Affecting Virulence, Tolerance, and Persistence. |
Savijoki K, Myllymaki H, Luukinen H, Paulamaki L, Vanha-Aho LM, Svorjova A, Miettinen I, Fallarero A, Ihalainen TO, Yli-Kauhaluoma J, Nyman TA, Parikka M |
mSystems |
10.1128/mSystems.00500-21 |
2021 |
* |
|
- References
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#11690 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 44344
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#36349 |
; Curators of the CIP;
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#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
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-
#68379 |
Automatically annotated from API Coryne .
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-
#68382 |
Automatically annotated from API zym .
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-
#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
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#77675 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID34648.1 )
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#120812 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 104528
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- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
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