Name: Enterococcus faecium DSM 20477
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5301

Type strain:

Species: Enterococcus faecium

Culture col. no.: DSM 20477, ATCC 19434, NCDO 942, NCTC 7171, WDCM 00010, CCUG 542, LMG 8149, LMG 11423, CCM 7167, JCM 5804, BCRC 10067, CECT 410, CFBP 4248, CGMCC 1.2136, CIP 103014, HAMBI 1710, JCM 8727, NBRC 100485, NBRC 100486, NCIMB 11508, VTT E-93204

Strain history: CIP <- 1987, NCFB <- 1956, NCTC <- 1946, A. Grumbach

NCBI tax ID(s): 1218090 (strain), 1352 (species)

SI-ID 9315

LMG 11423, ATCC 19434, CCRC 10067, CCUG 542, CECT 410, CIP 103014, DSM 20477, JCM 5804, LMG 12692, LMG 8149, NCFB 942, NCIMB 11508, NCTC 7171, JCM 8727, NCDO 942, NCIB 11508, NCIMB 13344, VTT E-93204, AS 1.2136, CCM 7167, NBRC 100485, NBRC 100486, BCRC 10067, HAMBI 1710, CGMCC 1.2136, CFBP 4248

Other strains from Enterococcus faecium

Section

Enterococcus faecium DSM 20477 is a microaerophile, mesophilic bacterium that has multiple antibiotic resistances.

antibiotic resistance
mesophilic
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Enterococcaceae*
	Genus	*Enterococcus*
	Species	**Enterococcus faecium**
	Full Scientific Name (LPSN)	Enterococcus faecium (Orla-Jensen 1919) Schleifer and Kilpper-Bälz 1984

Synonym

Streptococcus faecium

Information on morphological and physiological properties Morphology

[Ref.: #119227]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #119227]	Cell shape	coccus-shaped

[Ref.: #119227]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %91.894

[Ref.: #8846]	Type of hemolysis	alpha
[Ref.: #8846]	Hemolysis ability	1
[Ref.: #8846]	Incubation period	1-2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8846]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #8846]

Culture medium growth

[Ref.: #8846]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8846]

Culture medium composition

expand / minimize

[Ref.: #8846]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #8846]

Culture medium growth

[Ref.: #8846]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8846]

Culture medium composition

expand / minimize

[Ref.: #41268]

Culture medium

MEDIUM 29- Brain heart agar

[Ref.: #41268]

Culture medium growth

[Ref.: #41268]

Culture medium composition

expand / minimize

[Ref.: #119227]

Culture medium

CIP Medium 29

[Ref.: #119227]

Culture medium growth

[Ref.: #119227]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #8846]	growth	37 °C
[Ref.: #41268]	growth	37 °C
[Ref.: #67770]	growth	37 °C
[Ref.: #119227]	growth	10-45 °C

[Ref.: #8846]	Temperature range	mesophilic
[Ref.: #41268]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #8846]	Oxygen tolerance	microaerophile
[Ref.: #119227]	Oxygen tolerance	facultative anaerobe

Note that the displayed test results represent raw data and therefore may deviate!

Antibiotic susceptibility testing

Test 1

Test 2

Test 3

Test 4

Test 5

Test 6

Test 7

Reference

[Ref.: #8846]
Mueller-Hinton Agar



yes
Inhibition zone diameter in mm
22
12
28
24-26
22
14
8
14
resistant0
24
30
26
18
18
24
18
28
12-14
16
resistant0
resistant0
16-18
14
resistant0
24-26
16-18
32-34
16
32
16-18
14
24-26
resistant0
28
18-20
20

[Ref.: #8846]
Mueller-Hinton Agar
37
1
microaerophil
yes
Inhibition zone diameter in mm
26
16
30
28
24-26
18
10
20-22
resistant0
26-28
34
28
16-18
18
24
20
30
16
18
resistant0
resistant0
16-18
14-16
6
14
18
34
20
34
16
18
32
resistant0
30
20
22

[Ref.: #8846]
Mueller-Hinton Agar
37
1
microaerophil
yes
Inhibition zone diameter in mm
26
14-16
30
28
24
18
12-14
20
resistant0
26
34
26
16
14-16
22
16
30
14-16
18
resistant0
resistant0
14
16
resistant0
12
14
32
20-22
32
18
16
30
resistant0
26
18
22-24

[Ref.: #8846]
Mueller-Hinton Agar
37

microaerophil
yes
Inhibition zone diameter in mm
16
resistant0
16
16
10
6
resistant0
resistant0
resistant0
18-20
18
18
12
12
14
10
18-20
resistant0
10
resistant0
resistant0
resistant0
10
resistant0
10
10
20
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.

[Ref.: #8846]
Mueller-Hinton Agar



yes
Inhibition zone diameter in mm
22-24
12
28
26-28
24
16
12
14
resistant0
28
34-36
28
18
18
26
20
30
14-16
16-18
resistant0
resistant0
16-18
16
resistant0
24-26
18
34
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.

[Ref.: #8846]
Mueller-Hinton Agar
37

microaerophil
yes
Inhibition zone diameter in mm
22
12-14
26-28
22-24
20
16
8
20
resistant0
24
30
26
16
16
20
18
26-28
14
14-16
resistant0
resistant0
10
14
resistant0
12-14
16
30
18
30
14
14
28
resistant0
26
16-18
20

[Ref.: #8846]
Mueller-Hinton Agar
37

microaerophil
yes
Inhibition zone diameter in mm
22
12-14
26-28
22-24
20
16
8
20
resistant0
24
30
26
16
16
20
18
26-28
14
14-16
resistant0
resistant0
10
14
resistant0
12-14
16
30
18
30
14
14
28
resistant0
26
16-18
20

Only first 15 entries are displayed. Click here to see all.

[Ref.: #69480]

Ability of spore formation

no Confidence in %99.951

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #119227]		NaCl		growth	6.5	%

[Ref.: #8846]	Murein short key	A11.31
[Ref.: #8846]	Murein types	A4alpha L-Lys-D-Asp

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68381]	alpha-cyclodextrin ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	arginine ChEBI	+	hydrolysis	* from API rID32STR
[Ref.: #68381]	D-arabitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68377]	D-fructose ChEBI	+	builds acid from	* from API NH
[Ref.: #68377]	D-glucose ChEBI	+	builds acid from	* from API NH
[Ref.: #68381]	D-mannitol ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	D-ribose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	D-tagatose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #119227]	esculin ChEBI	+	hydrolysis
[Ref.: #68381]	glycogen ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #119227]	hippurate ChEBI	+	hydrolysis
[Ref.: #68381]	L-arabinose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	lactose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68377]	maltose ChEBI	+	builds acid from	* from API NH, API rID32STR
[Ref.: #68381]	melezitose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	melibiose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	methyl beta-D-glucopyranoside ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #119227]	nitrate ChEBI	-	reduction
[Ref.: #119227]	nitrite ChEBI	-	reduction
[Ref.: #68377]	ornithine ChEBI	-	degradation	* from API NH
[Ref.: #68381]	pullulan ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	raffinose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	sorbitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68377]	sucrose ChEBI	+	builds acid from	* from API NH, API rID32STR
[Ref.: #68381]	trehalose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68377]	tryptophan ChEBI	-	energy source	* from API NH
[Ref.: #68377]	urea ChEBI	-	hydrolysis	* from API NH, API rID32STR
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68381]		acetoin ChEBI	yes	* from API rID32STR
[Ref.: #68377]		indole ChEBI	no	* from API NH

	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #119227]	acetoin ChEBI	+
[Ref.: #68381]	acetoin ChEBI	+		* from API rID32STR
[Ref.: #68377]	indole ChEBI		-	* from API NH

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68381]	Alanyl-Phenylalanyl-Proline arylamidase	-		* from API rID32STR
[Ref.: #119227]	alcohol dehydrogenase	+	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68381]	alkaline phosphatase	-	3.1.3.1	* from API rID32STR, API NH
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym, API rID32STR
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68381]	arginine dihydrolase	+	3.5.3.6	* from API rID32STR
[Ref.: #119227]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym, API NH
[Ref.: #68381]	beta-glucosidase	+	3.2.1.21	* from API rID32STR
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym, API rID32STR
[Ref.: #68377]	beta-lactamase	-	3.5.2.6	* from API NH
[Ref.: #68381]	beta-mannosidase	+	3.2.1.25	* from API rID32STR
[Ref.: #119227]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #8846]	cytochrome-c oxidase	-	1.9.3.1
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #119227]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #68377]	gamma-glutamyltransferase	-	2.3.2.2	* from API NH
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68377]	lipase	-		* from API NH
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #119227]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #119227]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #68377]	ornithine decarboxylase	-	4.1.1.17	* from API NH
[Ref.: #119227]	oxidase	-
[Ref.: #68377]	proline-arylamidase	-	3.4.11.5	* from API NH
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68377]	tryptophan deaminase	-	4.1.99.1	* from API NH
[Ref.: #68381]	urease	-	3.5.1.5	* from API rID32STR, API NH
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® NH:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Penicillinase productionPEN	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from maltoseMAL	Acid from sucroseSAC	Ornithine decarboxylaseODC	Urease/urea hydrolysisURE	LipaseLIP	Alkaline phosphatasePAL	beta-Galactosidasebeta GAL	Proline arylamidaseProA	gamma-Glutamyl transferaseGGT	Indole productionIND
[Ref.: #44225]	1930	-	+	+	+	+	-	-	-	-	+	-	-	-

API® rID32STR:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Arginine dihydrolaseADH (Arg)	beta-Glucosidasebeta GLU	beta-Galactosidasebeta GAR	beta-Glucuronidasebeta GUR	alpha-Galactosidasealpha GAL	Alkaline PhosphatasePAL	Acid from D-riboseRIB	Acid from D-mannitolMAN	Acid from sorbitolSOR	Acid from lactoseLAC	Acid from trehaloseTRE	Acid from raffinoseRAF	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta-Galactosidasebeta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	Hydrolysis of hippuric acidHIP	Acid from glycogenGLYG	Acid from pullulanPUL	Acid from maltoseMAL	Acid from melibioseMEL	Acid from melezitoseMLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	Acid from D-tagatoseTAG	beta-Mannosidasebeta MAN	Urease/urea hydrolysisURE
[Ref.: #8846]	10803	+	+	+	-	-	-	+	+	-	+	+	-	+	+	-	+	+	-	+	+	+	+	+	-	-	+	-	-	+	-	+	-
[Ref.: #8846]	10749	+	+	-	-	-	-	+	+	-	+	+	-	+	+	-	+	+	-	+	+	+	+	-	-	-	+	-	-	+	-	+	-
[Ref.: #8846]	10416	+	+	+/-	-	-	-	+	+	-	+	+	-	+	+	-	+	+	-	+	+	+	-	-	-	-	+	-	-	+	-	+	-
[Ref.: #8846]	10415	+	+	+	-	-	-	+	+	-	+	+	-	+	+	-	+	+	-	+	+	+	+	-	-	-	+	-	-	+	-	+	-
[Ref.: #8846]	10414	+	+	+	-	-	-	+	+	-	+	+	-	+	+	-	+	+	not determinedn.d.	-	-	-	-	+	-	-	+	-	-	+	-	+	-
[Ref.: #8846]	10900	+	+	+	-	-	-	+	+	-	+	+	-	+	+	-	+	+	-	+	+	+	+	+	-	-	+	-	-	+	-	+	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #119227]	7308	-	+	+	+	-	+	+	-	-	-	+	-	-	+	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69479]

Global distribution of 16S sequence LC096216 (>99% sequence identity) for Enterococcus from Microbeatlas

Aquatic Samples	2532
Soil Samples	1007
Animal Samples	51351
Plant Samples	654
Total Samples	55544

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8846]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #119227]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Enterococcus faecium 16S rRNA gene, strain CECT410T	AJ420800	1489	ENA	1352 tax ID
[Ref.: #67770]	Enterococcus faecium gene for 16S ribosomal RNA, partial sequence, strain: JCM 5804	LC071831	1492	ENA	1352 tax ID
[Ref.: #8846]	Enterococcus faecium gene for 16S ribosomal RNA, partial sequence, strain: JCM 8727	LC096216	1499	ENA	1352 tax ID
[Ref.: #67770]	Enterococcus faecium 16S rRNA gene, strain LMG 11423	AJ301830	1651	ENA	1352 tax ID
[Ref.: #20218]	Enterococcus faecium strain ATCC 19434 16S-23S ribosomal RNA intergenic spacer, partial sequence	AY351322	344	ENA	1352 tax ID	*
[Ref.: #20218]	Enterococcus faecium strain DSM 20477 16S ribosomal RNA gene, partial sequence	HQ012007	936	ENA	1352 tax ID	*
[Ref.: #20218]	Enterococcus faecium strain ATCC 19434 16S ribosomal RNA gene, partial sequence	KC510233	815	ENA	1352 tax ID	*
[Ref.: #20218]	E.faecium 16S rRNA gene, partial (strain ATTC 19434 (CCUG 542))	Y12906	366	ENA	1352 tax ID	*
[Ref.: #20218]	E.faecium 16S-23S rRNA spacer DNA, strain ATCC 19434	X87180	344	ENA	1352 tax ID	*
[Ref.: #20218]	Enterococcus faecium strain ATCC 19434 16S ribosomal RNA gene, partial sequence	DQ411813	1482	ENA	1352 tax ID	*
[Ref.: #20218]	Enterococcus faecium 16S rRNA gene, strain DSM20477	AJ276355	1533	ENA	1352 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Enterococcus faecium NCTC7171	GCA_900447735	contig	GenBank	1352 tax ID
[Ref.: #66792]	Enterococcus faecium NBRC 100486	GCA_001544255	contig	GenBank	1218090 tax ID	*
[Ref.: #66792]	Enterococcus faecium NBRC 100486	1218090.3	wgs	PATRIC	1218090 tax ID	*
[Ref.: #66792]	Enterococcus faecium strain NCTC7171	1352.4067	wgs	PATRIC	1352 tax ID	*
[Ref.: #66792]	Enterococcus faecium NBRC 100486	2731957566	draft	JGI IMG/M	1218090 tax ID	*
[Ref.: #66792]	Enterococcus faecium NCTC 7171	2916553101	draft	JGI IMG/M	1352 tax ID	*

[Ref.: #67770]

GC-content

39 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Enterococcus faecium strain NCTC7171 PATRIC: 1352.4067
[Ref.: #69481]	spore-forming	yes	82	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Enterococcus faecium NBRC 100486 PATRIC: 1218090.3
[Ref.: #69480]	motile	no	94.341	no
[Ref.: #69480]	gram-positive	yes	95.56	no
[Ref.: #69480]	anaerobic	no	96.81	yes
[Ref.: #69480]	aerobic	no	93.925	yes
[Ref.: #69480]	halophile	yes	93.83	no
[Ref.: #69480]	spore-forming	no	91.373	no
[Ref.: #69480]	glucose-util	yes	89.35	no
[Ref.: #69480]	flagellated	no	98.366	no
[Ref.: #69480]	thermophile	no	99.671	no
[Ref.: #69480]	glucose-ferment	yes	87.533	no

Availability in culture collections External links

[Ref.: #8846]

Culture collection no.

DSM 20477, ATCC 19434, NCDO 942, NCTC 7171, WDCM 00010, CCUG 542, LMG 8149, LMG 11423, CCM 7167, JCM 5804, BCRC 10067, CECT 410, CFBP 4248, CGMCC 1.2136, CIP 103014, HAMBI 1710, JCM 8727, NBRC 100485, NBRC 100486, NCIMB 11508, VTT E-93204

[Ref.: #74791]

SI-ID 9315

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Genome-based studies indicate that the Enterococcus faecium Clade B strains belong to Enterococcus lactis species and lack of the hospital infection associated markers.	Belloso Daza MV, Cortimiglia C, Bassi D, Cocconcelli PS	Int J Syst Evol Microbiol	10.1099/ijsem.0.004948	2021	*
Pathogenicity	Isolation and characterization of Enterococcus faecium DSM 20477 with ability to secrete antimicrobial substance for the inhibition of oral pathogen Streptococcus mutans UKMCC 1019.	Ng ZJ, Zarin MA, Lee CK, Phapugrangkul P, Tan JS	Arch Oral Biol	10.1016/j.archoralbio.2019.104617	2019	*
Pathogenicity	Gut-derived Enterococcus faecium from ulcerative colitis patients promotes colitis in a genetically susceptible mouse host.	Seishima J, Iida N, Kitamura K, Yutani M, Wang Z, Seki A, Yamashita T, Sakai Y, Honda M, Yamashita T, Kagaya T, Shirota Y, Fujinaga Y, Mizukoshi E, Kaneko S	Genome Biol	10.1186/s13059-019-1879-9	2019	*
Pathogenicity	Comparative study of host-associated and commercial probiotic effects on serum and mucosal immune parameters, intestinal microbiota, digestive enzymes activity and growth performance of roach (Rutilus rutilus caspicus) fingerlings.	Tarkhani R, Imani A, Hoseinifar SH, Ashayerizadeh O, Sarvi Moghanlou K, Manaffar R, Van Doan H, Reverter M	Fish Shellfish Immunol	10.1016/j.fsi.2019.10.063	2019	*
Enzymology	Bactericidal and antioxidant properties of essential oils from the fruits Dennettia tripetala G. Baker.	Okoh SO, Iweriegbor BC, Okoh OO, Nwodo UU, I Okoh A	BMC Complement Altern Med	10.1186/s12906-016-1459-4	2016	*
Phylogeny	Enterococcus Xinjiangensis sp. nov., Isolated from Yogurt of Xinjiang, China.	Ren X, Li M, Guo D	Curr Microbiol	10.1007/s00284-016-1065-1	2016	*
Phylogeny	Enterococcus lactis sp. nov., from Italian raw milk cheeses.	Morandi S, Cremonesi P, Povolo M, Brasca M	Int J Syst Evol Microbiol	10.1099/ijs.0.030825-0	2011	*
Metabolism	Modelling the biphasic growth and product formation by Enterococcus faecium CECT 410 in realkalized fed-batch fermentations in whey.	Guerra NP, Fajardo P, Fucinos C, Amado IR, Alonso E, Torrado A, Pastrana L	J Biomed Biotechnol	10.1155/2010/290286	2010	*
Pathogenicity	The influence of some probiotic supernatants on the growth and virulence features expression of several selected enteroaggregative E. coli clinical strains.	Lazar V, Miyazaki Y, Hanawa T, Chifiriuc MC, Ditu LM, Marutescu L, Bleotu C, Kamiya S	Roum Arch Microbiol Immunol		2009	*
Phylogeny	Enterococcus thailandicus sp. nov., isolated from fermented sausage ('mum') in Thailand.	Tanasupawat S, Sukontasing S, Lee JS	Int J Syst Evol Microbiol	10.1099/ijs.0.65535-0	2008	*
Stress	Diversity of stress responses in dairy thermophilic streptococci.	Zotta T, Ricciardi A, Ciocia F, Rossano R, Parente E	Int J Food Microbiol	10.1016/j.ijfoodmicro.2008.02.024	2008	*
Pathogenicity	Combination of known and unknown mechanisms confers high-level resistance to fluoroquinolones in Enterococcus faecium.	Oyamada Y, Ito H, Fujimoto K, Asada R, Niga T, Okamoto R, Inoue M, Yamagishi JI	J Med Microbiol	10.1099/jmm.0.46303-0	2006	*
Cultivation	Characteristics and identification of enterocins produced by Enterococcus faecium JCM 5804T.	Park SH, Itoh K, Fujisawa T	J Appl Microbiol	10.1046/j.1365-2672.2003.01975.x	2003	*
Pathogenicity	Growth inhibition of intestinal bacteria and mutagenicity of 2-, 3-, 4-aminobiphenyls, benzidine, and biphenyl.	Chung KT, Adris P	Toxicol In Vitro	10.1016/s0887-2333(02)00131-5	2003	*
Enzymology	Isolation and biochemical characterisation of enterocins produced by enterococci from different sources.	Foulquie Moreno MR, Callewaert R, Devreese B, Van Beeumen J, De Vuyst L	J Appl Microbiol	10.1046/j.1365-2672.2003.01823.x	2003	*
Genetics	Physical and genetic map of Enterococcus faecium ATCC19434 and demonstration of intra- and interspecific genomic diversity in enterococci.	Oana K, Okimura Y, Kawakami Y, Hayashida N, Shimosaka M, Okazaki M, Hayashi T, Ohnishi M	FEMS Microbiol Lett	10.1111/j.1574-6968.2002.tb11041.x	2002	*
Metabolism	Mechanisms of resistance to imipenem in imipenem-resistant, ampicillin-sensitive Enterococcus faecium.	El Amin N, Lund B, Tjernlund A, Lundberg C, Jalakas K, Wretlind B	APMIS	10.1034/j.1600-0463.2001.d01-148.x	2001	*
Phylogeny	Probiotics shown to change bacterial community structure in the avian gastrointestinal tract.	Netherwood T, Gilbert HJ, Parker DS, O'Donnell AG	Appl Environ Microbiol	10.1128/AEM.65.11.5134-5138.1999	1999	*
Genetics	Determination of the nucleotide sequence of the 23S ribosomal RNA and flanking spacers of an Enterococcus faecium strain, reveals insertion-deletion events in the ribosomal spacer 1 of enterococci.	Naimi A, Beck G, Monique M, Lefebvre G, Branlanti C	Syst Appl Microbiol	10.1016/S0723-2020(99)80023-X	1999	*
Genetics	Characterization of new insertion-like sequences of Enterococcus hirae and their dissemination among clinical Enterococcus faecium isolates.	Sechi LA, Franklin R, Dupre I, Zanetti S, Fadda G, Daneo-Moore L	FEMS Microbiol Lett	10.1111/j.1574-6968.1998.tb12944.x	1998	*
Phylogeny	DNA hybridization and contour-clamped homogeneous electric field electrophoresis for identification of enterococci to the species level.	Donabedian S, Chow JW, Shlaes DM, Green M, Zervos MJ	J Clin Microbiol	10.1128/jcm.33.1.141-145.1995	1995	*
Phylogeny	Construction and use of a computerized DNA fingerprint database for lactic acid bacteria from silage.	Chan RK, Wortman CR, Smiley BK, Hendrick CA	J Microbiol Methods	10.1016/s0167-7012(03)00186-6	2003	*
	Development of a colorimetric enzymatic assay method for aromatic biogenic monoamine-producing decarboxylases.	Kim YC, Lee J, Park JH, Mah JH, Kim SY, Kim YW	Food Sci Biotechnol	10.1007/s10068-021-00938-4	2021	*
	Identification of Dairy Fungal Contamination and Reduction of Aflatoxin M1 Amount by Three Acid and Bile Resistant Probiotic Bacteria.	Faghihi Shahrestani F, Tajabadi Ebrahimi M, Bayat M, Hashemi J, Razavilar V	Arch Razi Inst	10.22092/ari.2019.126572.1347	2021	*
	Enterococcus faecium WB2000 Inhibits Biofilm Formation by Oral Cariogenic Streptococci.	Suzuki N, Yoneda M, Hatano Y, Iwamoto T, Masuo Y, Hirofuji T	Int J Dent	10.1155/2011/834151	2011	*
	Characterization of lactic acid bacteria isolated from the poultry intestinal environment with anti-Salmonella activity in vitro.	Hidalgo VM, Babot JD, Fernandez MM, Perez Chaia A, Audisio C, Apella MC	Braz J Microbiol	10.1007/s42770-022-00860-9	2022	*

References

#8846

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20477

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#41268 ; Curators of the CIP;
#44225 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 542

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68377

Automatically annotated from API NH .

#68381

Automatically annotated from API rID32STR .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#74791

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID9315.1 )

#119227 Collection of Institut Pasteur ; Curators of the CIP; CIP 103014
* These data were automatically processed and therefore are not curated

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