[Ref.: #6729] |
Sample type/isolated from |
water soaked lesion on cotyledon of Citrullus lanatus |
[Ref.: #6729] |
Host species |
Citrullus lanatus |
[Ref.: #6729] |
Country |
USA |
[Ref.: #6729] |
Country ISO 3 Code |
USA |
[Ref.: #6729] |
Continent |
North America |
|
[Ref.: #46607] |
Sample type/isolated from |
Citrullus lanatus,watersoaked lesion on cotyledon |
[Ref.: #46607] |
Sampling date |
1977 |
[Ref.: #46607] |
Country |
USA |
[Ref.: #46607] |
Country ISO 3 Code |
USA |
[Ref.: #46607] |
Continent |
North America |
* marker position based on {}
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Isolation sources categories |
#Host |
#Plants |
#Herbaceous plants (Grass,Crops) |
#Host Body-Site |
#Other |
#Wound |
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Information on genomic background e.g. entries in nucleic sequence databass Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #20218] |
Acidovorax citrulli strain ATCC 29625 16S ribosomal RNA gene, partial sequence |
AF078761 |
1517 |
|
80869 tax ID |
* |
[Ref.: #20218] |
Acidovorax avenae subsp. citrulli strain FC-247 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence |
DQ360418 |
615 |
|
80869 tax ID |
* |
[Ref.: #20218] |
Acidovorax citrulli strain ICMP 7500 16S ribosomal RNA gene, partial sequence |
GU339088 |
1490 |
|
80869 tax ID |
* |
[Ref.: #20218] |
Acidovorax citrulli strain ICMP 7500 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence |
GU339093 |
898 |
|
80869 tax ID |
* |
[Ref.: #20218] |
Acidovorax citrulli strain BC525 16S ribosomal RNA gene, partial sequence |
JQ743863 |
1426 |
|
80869 tax ID |
* |
[Ref.: #20218] |
Acidovorax citrulli strain BC525 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence |
JQ743876 |
676 |
|
80869 tax ID |
* |
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Genome sequence information: |
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|
Sequence accession description |
Seq. accession number |
Assembly level |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #66792] |
Paracidovorax citrulli DSM 17060 |
GCA_900100305 |
scaffold |
|
80869 tax ID |
* |
[Ref.: #66792] |
Acidovorax citrulli strain DSM 17060 |
80869.24 |
wgs |
|
80869 tax ID |
* |
[Ref.: #66792] |
Acidovorax citrulli DSM 17060 |
2634166347 |
draft |
|
80869 tax ID |
* |
|
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Availability in culture collections External links
- References
-
#6729 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 17060
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#39524 |
; Curators of the CIP;
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#46607 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 17393
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#68369 |
Automatically annotated from API 20NE .
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#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
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#72424 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID121.1 )
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- * These data were automatically processed and therefore are not curated
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