Name: Aeromonas caviae B-968
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 253

Type strain:

Species: Aeromonas caviae

Strain Designation: B-968

Culture col. no.: DSM 7323, ATCC 15468, NRRL B-968, WDCM 00062, NCTC 12244, JCM 1060, BCRC 16001, CCM 4491, CCUG 25939, CECT 838, CGMCC 1.1960, CIP 76.16, GTC 00465, LMG 12160, LMG 3775, NCAIM B.01931, NCIMB 13016, CIP 110812, ATCC 15466

Strain history: CIP <- 2014, DSMZ <- ATCC <- R. Schubert, Aeromonas punctata subsp. caviae <- P. Liu <- NRRL <- M. Scherago

NCBI tax ID(s): 648 (species)

SI-ID 365

ATCC 15468, CCUG 25939, LMG 3775, DSM 30190, IMET 11045, JCM 1060, LMG 12160, NRRL B-968, DSM 7323, NCIMB 13016, CCM 4491, CIP 76.16, CECT 838, NCTC 12244, BCRC 16001, CCRC 16001, NCAIM B.01931, CNCTC 5716, CGMCC 1.1960

Other strains from Aeromonas caviae

A. caviae 256, 544, DSM 30188, ATCC 15467, ...
A. caviae STI08310(IMET), IFO 14303, IMET ...
A. caviae WS 41333, DSM 30025
A. caviae AecaKS148, KS148, DSM 29415
A. caviae Coallier, CIP 67.24
A. caviae CIP 67.12
A. caviae CIP 102629
A. caviae CCUG 409, NCTC 10362, JCM 2526, ...
A. caviae CCUG 15383
A. caviae CCUG 19144
A. caviae CCUG 21694
A. caviae CCUG 21695
A. caviae CCUG 21696
A. caviae CCUG 21864 B
A. caviae CCUG 26139
A. caviae CCUG 26636
A. caviae CCUG 32605
A. caviae CCUG 33484
A. caviae CCUG 37616
A. caviae CCUG 43595
A. caviae CCUG 44411
A. caviae CCUG 44636
A. caviae CCUG 45103
A. caviae CCUG 47031
A. caviae CCUG 48892
A. caviae CCUG 51455
A. caviae CCUG 57693
A. caviae CCUG 59790
A. caviae CCUG 60365
A. caviae CCUG 61686
A. caviae CCUG 65067
A. caviae JCM 2362
A. caviae JCM 2363
A. caviae JCM 2364
A. caviae JCM 3965
A. caviae JCM 3979, ATCC 13137, CDC 2071-58, ...
A. caviae JCM 3993
A. caviae JCM 4000
A. caviae JCM 5081
A. caviae JCM 5082

Section

Aeromonas caviae B-968 is a facultative anaerobe, mesophilic, motile human pathogen that was isolated from Epizootic of young guinea pigs.

motile
facultative anaerobe
human pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Aeromonadales*
	Family	*Aeromonadaceae*
	Genus	*Aeromonas*
	Species	**Aeromonas caviae**
	Full Scientific Name (LPSN)	Aeromonas caviae (Scherago 1936) Popoff 1984

	Synonym	Aeromonas punctata
	Synonym	Aeromonas punctata subsp. caviae
	Synonym	"Bacillus* punctatus"*
	Synonym	Aeromonas hydrophila subsp. anaerogenes
	Synonym	"Pseudomonas* caviae"*

Information on morphological and physiological properties Morphology

[Ref.: #117223]	Gram stain	negative
[Ref.: #117222]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.997

[Ref.: #117223]	Cell shape	rod-shaped
[Ref.: #117222]	Cell shape	rod-shaped

[Ref.: #117223]	Motility	yes
[Ref.: #117222]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %99.098

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2998]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #2998]

Culture medium growth

[Ref.: #2998]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2998]

Culture medium composition

expand / minimize

[Ref.: #36285]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #36285]

Culture medium growth

[Ref.: #36285]

Culture medium composition

expand / minimize

[Ref.: #41809]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #41809]

Culture medium growth

[Ref.: #41809]

Culture medium composition

expand / minimize

[Ref.: #117222]

Culture medium

CIP Medium 3

[Ref.: #117222]

Culture medium growth

[Ref.: #117222]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #117222]

Culture medium

CIP Medium 72

[Ref.: #117222]

Culture medium growth

[Ref.: #117222]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #117223]

Culture medium

CIP Medium 72

[Ref.: #117223]

Culture medium growth

[Ref.: #117223]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #2998]		growth	28 °C
[Ref.: #36285]		growth	30 °C
[Ref.: #41809]		growth	30 °C
[Ref.: #67770]		growth	30 °C
[Ref.: #117222]		growth	30-37 °C
[Ref.: #117222]	no	growth	5 °C
[Ref.: #117222]	no	growth	10 °C
[Ref.: #117222]	no	growth	41 °C

[Ref.: #2998]	Temperature range	mesophilic
[Ref.: #36285]	Temperature range	mesophilic
[Ref.: #41809]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #117222]	Temperature range	mesophilic
[Ref.: #117222]	Temperature range	psychrophilic
[Ref.: #117222]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #117222]

Oxygen tolerance

facultative anaerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.987

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68368]	amygdalin ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #117222]	citrate ChEBI	-	carbon source
[Ref.: #68368]	citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #68368]	D-glucose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	D-mannitol ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #117222]	glucose ChEBI	+	fermentation
[Ref.: #117222]	glucose ChEBI	+	degradation
[Ref.: #68368]	L-arabinose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	L-rhamnose ChEBI	-	fermentation	* from API 20E
[Ref.: #117222]	lactose ChEBI	-	fermentation
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #117222]	malonate ChEBI	-	assimilation
[Ref.: #117222]	mannitol ChEBI	+	fermentation
[Ref.: #68368]	melibiose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	myo-inositol ChEBI	-	fermentation	* from API 20E
[Ref.: #117222]	nitrate ChEBI	+	reduction
[Ref.: #117222]	nitrite ChEBI	+	reduction
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #117222]	sodium thiosulfate ChEBI	-	builds gas from
[Ref.: #68368]	sorbitol ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	sucrose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	tryptophan ChEBI	+	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #117222]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite	Production
[Ref.: #117222]	indole ChEBI	yes
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	yes	* from API 20E

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #117222]	acetoin ChEBI	-
[Ref.: #117222]	glucose ChEBI		+
[Ref.: #68368]	indole ChEBI			+	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #117222]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #117222]	amylase	-
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #117222]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym, API 20E
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	+	3.2.1.31	* from API zym
[Ref.: #117222]	caseinase	-	3.4.21.50
[Ref.: #117222]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68368]	cytochrome oxidase	+	1.9.3.1	* from API 20E
[Ref.: #117222]	DNase	+
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #117222]	gelatinase	+/-
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #117222]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #117222]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #117222]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #117222]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #117222]	oxidase	+
[Ref.: #117222]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #117222]	tryptophan deaminase	-
[Ref.: #117222]	tween esterase	-
[Ref.: #117222]	urease	-	3.5.1.5
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #2998]	16749	+	+	-	-	-	-	-	+/-	+	-	+	+	+	-	-	-	+	-	+	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
[Ref.: #2998]	16743	+	+	-	-	-	-	-	-	+	+	+	+	+	-	-	-	+	-	+	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #117222]	3345	not determinedn.d.	+	+	+	+	-	-	-	+	-	+	+	+	-	+	-	+	-	+	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	+	-	+	+	+	-	+	-	-	-	+	-	-	+	+	+	+	-	+	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #117222]	13294	-	+	+	+	-	+	+	-	+	-	+	+	-	+	+	-	+	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2998]	Sample type/isolated from	Epizootic of young guinea pigs
[Ref.: #2998]	Country	USA
[Ref.: #2998]	Country ISO 3 Code	USA
[Ref.: #2998]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Epizootic of young guinea pigs

[Ref.: #117222]	Sample type/isolated from	Epizootic among young guinea pigs

[Ref.: #117223]	Sample type/isolated from	Epizootic of young guinea pigs
[Ref.: #117223]	Country	United States of America
[Ref.: #117223]	Country ISO 3 Code	USA
[Ref.: #117223]	Continent	North America
* marker position based on {}

Isolation sources categories

#Infection	#Disease	-
#Host	#Mammals	#Suidae (Pig,Swine)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence X60408 (>99% sequence identity) for Aeromonas from Microbeatlas

Aquatic Samples	400
Soil Samples	45
Animal Samples	595
Plant Samples	47
Total Samples	1087

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2998]	Pathogenicity (human)	yes
[Ref.: #2998]	Pathogenicity (animal)	yes
[Ref.: #2998]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #117222]	Biosafety level	1	Risk group (French classification)
[Ref.: #117223]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #2998]	A.caviae (ATCC 15468T) gene for 16S ribosomal RNA	X74674	1460	ENA	648 tax ID
[Ref.: #20218]	Aeromonas caviae strain ATCC15468 16S-23S ribosomal RNA intergenic spacer region type 1	AF198363	476	ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae strain ATCC15468 16S-23S ribosomal RNA intergenic spacer region type 2	AF198364	521	ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae strain ATCC15468 16S-23S ribosomal RNA intergenic spacer region type 3	AF198365	592	ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas punctata strain ATCC 15468 clone 1 16S-23S ribosomal RNA intergenic spacer, complete sequence	EF373978	471	ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas punctata strain ATCC 15468 clone 3 16S-23S ribosomal RNA intergenic spacer, complete sequence	EF373979	471	ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas punctata strain ATCC 15468 clone 2 16S-23S ribosomal RNA intergenic spacer, complete sequence	EF373996	471	ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas punctata strain ATCC 15468 clone 4 16S-23S ribosomal RNA intergenic spacer, complete sequence	EF373997	587	ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae strain CECT 838 16S ribosomal RNA gene, partial sequence	JX014442	151	ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae gene for 16S rRNA, partial sequence, strain: JCM 1060	AB626132	1467	ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae 16S rRNA	D11169	214	ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae 16S rRNA	D11218	215	ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae 16S rRNA	D11267	200	ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae 16S rRNA gene, strain NCIMB 13016	X60408	1503	ENA	648 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Aeromonas caviae CECT 838	GCA_000819785	scaffold	GenBank	648 tax ID
[Ref.: #66792]	Aeromonas caviae CECT 838	GCA_018360005	contig	GenBank	648 tax ID	*
[Ref.: #66792]	Aeromonas caviae CECT 838	648.21	wgs	PATRIC	648 tax ID	*
[Ref.: #66792]	Aeromonas caviae strain CECT 838	648.319	wgs	PATRIC	648 tax ID	*
[Ref.: #66792]	Aeromonas caviae strain NCTC12244	648.115	complete	PATRIC	648 tax ID	*
[Ref.: #66792]	Aeromonas caviae NCTC 12244	2852469294	complete	JGI IMG/M	648 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Aeromonas caviae NCTC12244 NCBI: GCA_900476005.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Aeromonas caviae NCTC12244 NCBI: GCA_900476005.1
[Ref.: #69480]	flagellated	yes	91.614	no
[Ref.: #69480]	gram-positive	no	98.935	no
[Ref.: #69480]	anaerobic	no	97.142	no
[Ref.: #69480]	aerobic	yes	90.427	no
[Ref.: #69480]	halophile	no	90.135	no
[Ref.: #69480]	spore-forming	no	96.539	no
[Ref.: #69480]	thermophile	no	99.727	yes
[Ref.: #69480]	glucose-util	yes	89.435	no
[Ref.: #69480]	motile	yes	90.476	no
[Ref.: #69480]	glucose-ferment	yes	89.365	yes

Availability in culture collections External links

[Ref.: #2998]

Culture collection no.

DSM 7323, ATCC 15468, NRRL B-968, WDCM 00062, NCTC 12244, JCM 1060, BCRC 16001, CCM 4491, CCUG 25939, CECT 838, CGMCC 1.1960, CIP 76.16, GTC 00465, LMG 12160, LMG 3775, NCAIM B.01931, NCIMB 13016, CIP 110812, ATCC 15466

[Ref.: #69935]

SI-ID 365

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Conservation of the name Aeromonas eucrenophila over the name Aeromonas punctata for the organism based on type stain NCMB 74(T) and universally defined as 'Aeromonas DNA hybridization group 6'.	Farmer JJ, Holmes B	Int J Syst Evol Microbiol	10.1099/ijsem.0.003961	2020	*
Phylogeny	Correction of the type strain of Aeromonas punctata (Zimmermann 1890) Snieszko 1957 and of A. punctata subsp. punctata from ATCC 15468(T) to NCMB 74(T) (=NCIMB 74(T)= ATCC 23309(T)).	Holmes B, Farmer Iii JJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.003960	2020	*
Genetics	Structural characterization of the O-chain polysaccharide of Aeromonas caviae ATCC 15468 lipopolysaccharide.	Wang Z, Liu X, Li J, Altman E	Carbohydr Res	10.1016/j.carres.2007.11.016	2007	*
Pathogenicity	Cytotoxin and enterotoxin production as factors delineating enteropathogenicity of Aeromonas caviae.	Namdari H, Bottone EJ	J Clin Microbiol	10.1128/jcm.28.8.1796-1798.1990	1990	*
Pathogenicity	Microbiologic and clinical evidence supporting the role of Aeromonas caviae as a pediatric enteric pathogen.	Namdari H, Bottone EJ	J Clin Microbiol	10.1128/jcm.28.5.837-840.1990	1990	*
	Lectin-binding properties of Aeromonas caviae strains.	Rocha-de-Souza CM, Hirata R Jr, Mattos-Guaraldi AL, Freitas-Almeida AC, Andrade AF	Braz J Microbiol	10.1590/S1517-83822008000200003	2008	*

References

#2998

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 7323

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#36285 ; Curators of the CIP;
#41809 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

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Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID365.1 )

#117222 Collection of Institut Pasteur ; Curators of the CIP; CIP 76.16
#117223 Collection of Institut Pasteur ; Curators of the CIP; CIP 110812
* These data were automatically processed and therefore are not curated

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Aeromonas caviae NCTC12244

Aeromonas caviae NCTC12244

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