Name: Pseudoalteromonas translucida DSM 14402
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 12691

Type strain:

Species: Pseudoalteromonas translucida

Culture col. no.: DSM 14402, ATCC BAA-315, KMM 520, LMG 19696, CIP 107731

Strain history: CIP <- 2002, E. Ivanova, Swinburne Inst., Victoria, Australia

NCBI tax ID(s): 1315283 (strain), 166935 (species)

SI-ID 377531

LMG 19694, ATCC BAA-315, DSM 14402, CIP 107731

Other strains from Pseudoalteromonas translucida

P. translucida CIP 108707, TAC 125

Section

Pseudoalteromonas translucida DSM 14402 is an obligate aerobe, mesophilic, motile bacterium that was isolated from sea water.

motile
mesophilic
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Pseudoalteromonadaceae*
	Genus	*Pseudoalteromonas*
	Species	**Pseudoalteromonas translucida**
	Full Scientific Name (LPSN)	Pseudoalteromonas translucida Ivanova et al. 2002

Information on morphological and physiological properties Morphology

[Ref.: #123574]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.987

[Ref.: #123574]	Cell shape	rod-shaped

[Ref.: #123574]	Motility	no
[Ref.: #69480]	Motility	yes Confidence in %99.131

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5339]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #5339]

Culture medium growth

[Ref.: #5339]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5339]

Culture medium composition

expand / minimize

[Ref.: #42044]

Culture medium

Marine agar (MA)

[Ref.: #42044]

Culture medium growth

[Ref.: #42044]

Culture medium composition

expand / minimize

[Ref.: #123574]

Culture medium

CIP Medium 13

[Ref.: #123574]

Culture medium growth

[Ref.: #123574]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #5339]		growth	28 °C
[Ref.: #42044]		growth	25 °C
[Ref.: #123574]		growth	5-30 °C
[Ref.: #123574]	no	growth	37 °C
[Ref.: #123574]	no	growth	41 °C

[Ref.: #5339]	Temperature range	mesophilic
[Ref.: #42044]	Temperature range	mesophilic
[Ref.: #123574]	Temperature range	mesophilic
[Ref.: #123574]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #123574]

Oxygen tolerance

obligate aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.941

	Salt	Tested relation		Salt conc.
[Ref.: #123574]	NaCl		growth	2-8	%
[Ref.: #123574]	NaCl	no	growth	0	%
[Ref.: #123574]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #123574]	esculin ChEBI	-	hydrolysis
[Ref.: #123574]	nitrate ChEBI	-	reduction
[Ref.: #123574]	nitrate ChEBI	-	respiration
[Ref.: #123574]	nitrite ChEBI	-	reduction

	Metabolite production	Metabolite	Production
[Ref.: #123574]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #123574]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #123574]	amylase	-
[Ref.: #123574]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #123574]	caseinase	+	3.4.21.50
[Ref.: #123574]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #123574]	gelatinase	+
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #123574]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #123574]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #123574]	oxidase	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #123574]	tryptophan deaminase	-
[Ref.: #123574]	tween esterase	+
[Ref.: #123574]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #123574]	2407	not determinedn.d.	+	-	+	+	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	+	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	+	+	-	+	+	-	+	+	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #123574]	10608	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5339]	Sample type/isolated from	sea water
[Ref.: #5339]	Geographic location (country and/or sea, region)	Sea of Japan
[Ref.: #5339]	Country	Russia
[Ref.: #5339]	Country ISO 3 Code	RUS
[Ref.: #5339]	Continent	Asia

[Ref.: #123574]	Sample type/isolated from	Environment, Seawater
[Ref.: #123574]	Country	Japan
[Ref.: #123574]	Country ISO 3 Code	JPN
[Ref.: #123574]	Continent	Asia
[Ref.: #123574]	Isolation date	1997
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5339]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #123574]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5339]	Pseudoalteromonas sp. KMM 520 16S ribosomal RNA gene, partial sequence	AY040230	1500	ENA	1315283 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pseudoalteromonas translucida KMM 520	GCA_001465295	complete	GenBank	1315283 tax ID	*
[Ref.: #66792]	Pseudoalteromonas translucida KMM 520	1315283.4	complete	PATRIC	1315283 tax ID	*
[Ref.: #66792]	Pseudoalteromonas translucida KMM 520	2654587552	complete	JGI IMG/M	1315283 tax ID	*

[Ref.: #5339]

GC-content

46.3 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Pseudoalteromonas translucida KMM 520 PATRIC: 1315283.4
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pseudoalteromonas translucida KMM 520 KMM 520 NCBI: GCA_001465295.1
[Ref.: #69480]	flagellated	yes	84.974	no
[Ref.: #69480]	gram-positive	no	98.992	no
[Ref.: #69480]	anaerobic	no	96.839	no
[Ref.: #69480]	aerobic	yes	89.539	no
[Ref.: #69480]	halophile	no	53.187	no
[Ref.: #69480]	spore-forming	no	95.114	no
[Ref.: #69480]	glucose-util	yes	91.573	no
[Ref.: #69480]	motile	yes	89.846	no
[Ref.: #69480]	thermophile	no	99.13	yes
[Ref.: #69480]	glucose-ferment	no	72.337	no

Availability in culture collections External links

[Ref.: #5339]

Culture collection no.

DSM 14402, ATCC BAA-315, KMM 520, LMG 19696, CIP 107731

[Ref.: #81903]

SI-ID 377531

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Orthogonal CRISPR-associated transposases for parallel and multiplexed chromosomal integration.	Yang S, Zhang Y, Xu J, Zhang J, Zhang J, Yang J, Jiang Y, Yang S	Nucleic Acids Res	10.1093/nar/gkab752	2021	*
Genetics	Complete genome sequence of a marine bacterium with two chromosomes, Pseudoalteromonas translucida KMM 520(T).	Rong JC, Liu M, Li Y, Sun TY, Pang XH, Qin QL, Chen XL, Xie BB	Mar Genomics	10.1016/j.margen.2016.01.007	2016	*
Phylogeny	Pseudoalteromonas translucida sp. nov. and Pseudoalteromonas paragorgicola sp. nov., and emended description of the genus.	Ivanova EP, Sawabe T, Lysenko AM, Gorshkova NM, Hayashi K, Zhukova NV, Nicolau DV, Christen R, Mikhailov VV	Int J Syst Evol Microbiol	10.1099/00207713-52-5-1759	2002	*

References

#5339

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14402

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42044 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#81903

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID377531.1 )

#123574 Collection of Institut Pasteur ; Curators of the CIP; CIP 107731
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Pseudoalteromonas translucida in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Pseudoalteromonas translucida KMM 520

Pseudoalteromonas translucida KMM 520 KMM 520

Change proposal

Change proposal