Name: Pseudoalteromonas flavipulchra DSM 14401
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 12690

Type strain:

Species: Pseudoalteromonas flavipulchra

Culture col. no.: DSM 14401, KMM 3630, LMG 20361, NCIMB 2033, CIP 107428

Strain history: CIP <- 2002, NCIMB <- M.J. Gauthier, Nice, France

NCBI tax ID(s): 1315273 (strain), 137779 (species)

SI-ID 14997

LMG 20361, ATCC 33042, DSM 14401, NCIMB 2033, NCMB 2033, KCTC 12961, CIP 107428, ATCC BAA-314

Section

Pseudoalteromonas flavipulchra DSM 14401 is an obligate aerobe, mesophilic, motile bacterium that was isolated from seawater.

motile
mesophilic
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Pseudoalteromonadaceae*
	Genus	*Pseudoalteromonas*
	Species	**Pseudoalteromonas flavipulchra**
	Full Scientific Name (LPSN)	Pseudoalteromonas flavipulchra Ivanova et al. 2002

Information on morphological and physiological properties Morphology

[Ref.: #119379]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.975

[Ref.: #119379]	Cell shape	rod-shaped

[Ref.: #119379]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %97.759

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5338]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #5338]

Culture medium growth

[Ref.: #5338]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5338]

Culture medium composition

expand / minimize

[Ref.: #42042]

Culture medium

Marine agar (MA)

[Ref.: #42042]

Culture medium growth

[Ref.: #42042]

Culture medium composition

expand / minimize

[Ref.: #119379]

Culture medium

CIP Medium 13

[Ref.: #119379]

Culture medium growth

[Ref.: #119379]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #5338]		growth	28 °C
[Ref.: #42042]		growth	30 °C
[Ref.: #119379]		growth	25-37 °C
[Ref.: #119379]	no	growth	5 °C
[Ref.: #119379]	no	growth	10 °C
[Ref.: #119379]	no	growth	41 °C

[Ref.: #5338]	Temperature range	mesophilic
[Ref.: #42042]	Temperature range	mesophilic
[Ref.: #119379]	Temperature range	mesophilic
[Ref.: #119379]	Temperature range	psychrophilic
[Ref.: #119379]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #119379]

Oxygen tolerance

obligate aerobe

[Ref.: #119379]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.69

	Salt	Tested relation		Salt conc.
[Ref.: #119379]	NaCl		growth	2-8	%
[Ref.: #119379]	NaCl	no	growth	0	%
[Ref.: #119379]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #119379]	esculin ChEBI	-	hydrolysis
[Ref.: #119379]	nitrate ChEBI	-	reduction
[Ref.: #119379]	nitrate ChEBI	-	respiration
[Ref.: #119379]	nitrite ChEBI	-	reduction

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #119379]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite production	Metabolite	Production
[Ref.: #119379]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #119379]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #119379]	amylase	+
[Ref.: #119379]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #119379]	caseinase	+	3.4.21.50
[Ref.: #119379]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #119379]	DNase	+
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #119379]	gelatinase	+
[Ref.: #119379]	lecithinase	+
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #119379]	lipase	+
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #119379]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #119379]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #119379]	oxidase	+
[Ref.: #119379]	protease	-
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #119379]	tryptophan deaminase	-
[Ref.: #119379]	tween esterase	+
[Ref.: #119379]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #119379]	2206	not determinedn.d.	+	-	-	+	+	-	-	+	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	+	-	-	-	+	+	-	+	+	-	+	+	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #119379]	10343	-	+	+	+	-	+	-	-	+	-	+	+	-	-	-	-	-	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5338]	Sample type/isolated from	seawater
[Ref.: #5338]	Geographic location (country and/or sea, region)	Nice
[Ref.: #5338]	Country	France
[Ref.: #5338]	Country ISO 3 Code	FRA
[Ref.: #5338]	Continent	Europe

[Ref.: #119379]	Sample type/isolated from	Environment, Seawater
[Ref.: #119379]	Geographic location (country and/or sea, region)	Nice
[Ref.: #119379]	Country	France
[Ref.: #119379]	Country ISO 3 Code	FRA
[Ref.: #119379]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF297958 (>99% sequence identity) for Pseudoalteromonas from Microbeatlas

Aquatic Samples	1221
Soil Samples	33
Animal Samples	253
Plant Samples	2
Total Samples	1509

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5338]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #119379]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5338]	Pseudoalteromonas flavipulchra 16S ribosomal RNA gene, partial sequence	AF297958	1483	ENA	137779 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pseudoalteromonas flavipulchra LMG 20361	GCA_014596995	contig	GenBank	137779 tax ID	*
[Ref.: #66792]	Pseudoalteromonas flavipulchra NCIMB 2033 = ATCC BAA-314	GCA_014858715	contig	GenBank	1315273 tax ID	*
[Ref.: #66792]	Pseudoalteromonas flavipulchra NCIMB 2033 = ATCC BAA-314	1315273.3	wgs	PATRIC	1315273 tax ID	*
[Ref.: #66792]	Pseudoalteromonas flavipulchra NCIMB 2033 = ATCC BAA-314	1315273.7	wgs	PATRIC	1315273 tax ID	*
[Ref.: #66792]	Pseudoalteromonas flavipulchra strain LMG 20361	137779.9	wgs	PATRIC	137779 tax ID	*
[Ref.: #66792]	Pseudoalteromonas flavipulchra NCIMB 2033 = ATCC BAA-314	2630968884	draft	JGI IMG/M	1315273 tax ID	*

[Ref.: #5338]

GC-content

41.7 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Pseudoalteromonas flavipulchra NCIMB 2033 = ATCC BAA-314 PATRIC: 1315273.7
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pseudoalteromonas flavipulchra NCIMB 2033 = ATCC BAA-314 PATRIC: 1315273.3
[Ref.: #69480]	motile	yes	89.633	no
[Ref.: #69480]	gram-positive	no	99.211	no
[Ref.: #69480]	anaerobic	no	97.723	no
[Ref.: #69480]	halophile	yes	63.169	no
[Ref.: #69480]	spore-forming	no	96.594	no
[Ref.: #69480]	glucose-util	yes	92.593	no
[Ref.: #69480]	flagellated	yes	88.822	no
[Ref.: #69480]	thermophile	no	98.867	yes
[Ref.: #69480]	aerobic	yes	91.478	no
[Ref.: #69480]	glucose-ferment	no	79.076	no

Availability in culture collections External links

[Ref.: #5338]

Culture collection no.

DSM 14401, KMM 3630, LMG 20361, NCIMB 2033, CIP 107428

[Ref.: #81902]

SI-ID 14997

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Identification and Characterization of Three Chitinases with Potential in Direct Conversion of Crystalline Chitin into N,N'-diacetylchitobiose.	Ren XB, Dang YR, Liu SS, Huang KX, Qin QL, Chen XL, Zhang YZ, Wang YJ, Li PY	Mar Drugs	10.3390/md20030165	2022	*
Phylogeny	Pseudoalteromonas maricaloris sp. nov., isolated from an Australian sponge, and reclassification of [Pseudoalteromonas aurantia] NCIMB 2033 as Pseudoalteromonas flavipulchra sp. nov.	Ivanova EP, Shevchenko LS, Sawabe T, Lysenko AM, Svetashev VI, Gorshkova NM, Satomi M, Christen R, Mikhailov VV	Int J Syst Evol Microbiol	10.1099/00207713-52-1-263	2002	*
	Structure of an acidic polysaccharide from the marine bacterium Pseudoalteromonas flavipulchra NCIMB 2033(T).	Muldoon J, Perepelov AV, Shashkov AS, Nazarenko EL, Zubkov VA, Gorshkova RP, Ivanova EP, Gorshkova NM, Knirel YA, Savage AV	Carbohydr Res	10.1016/s0008-6215(02)00483-4	2003	*

References

#5338

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14401

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42042 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#81902

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID14997.1 )

#119379 Collection of Institut Pasteur ; Curators of the CIP; CIP 107428
* These data were automatically processed and therefore are not curated

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Pseudoalteromonas flavipulchra NCIMB 2033 = ATCC BAA-314

Pseudoalteromonas flavipulchra NCIMB 2033 = ATCC BAA-314

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