[Ref.: #5601] |
Sample type/isolated from |
Kimmeridge clay |
[Ref.: #5601] |
Country |
United Kingdom |
[Ref.: #5601] |
Country ISO 3 Code |
GBR |
[Ref.: #5601] |
Continent |
Europe |
|
[Ref.: #67770] |
Sample type/isolated from |
Kimmeridge clay |
[Ref.: #67770] |
Country |
United Kingdom |
[Ref.: #67770] |
Country ISO 3 Code |
GBR |
[Ref.: #67770] |
Continent |
Europe |
|
[Ref.: #123524] |
Sample type/isolated from |
Kimmeridge clay |
* marker position based on {}
|
|
Isolation sources categories |
#Environmental |
#Terrestrial |
#Geologic |
|
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-
Information on genomic background e.g. entries in nucleic sequence databass Sequence information
|
16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
|
|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #5601] |
Acidithiobacillus thiooxidans 16S rRNA gene, type strain ATCC19377 |
Y11596 |
1472 |
|
930 tax ID |
[Ref.: #20218] |
Acidithiobacillus thiooxidans strain ATCC 19377 16S ribosomal RNA gene, partial sequence; intergenic spacer, tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence |
AF512812 |
514 |
|
637390 tax ID |
* |
[Ref.: #20218] |
Acidithiobacillus thiooxidans strain ATCC 19377 16S ribosomal RNA gene, partial sequence |
AY552087 |
1485 |
|
637390 tax ID |
* |
[Ref.: #20218] |
Acidithiobacillus thiooxidans strain ATCC 19377 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence |
EF059790 |
632 |
|
637390 tax ID |
* |
[Ref.: #20218] |
Acidithiobacillus thiooxidans 16S rRNA gene, strain ATCC 19377 |
AJ459803 |
1434 |
|
637390 tax ID |
* |
[Ref.: #20218] |
Thiobacillus thiooxidans 16S rRNA sequence |
M79397 |
355 |
|
930 tax ID |
* |
[Ref.: #20218] |
Thiobacillus thiooxidans 16S rRNA sequence |
M79398 |
406 |
|
930 tax ID |
* |
[Ref.: #20218] |
Acidithiobacillus thiooxidans gene, 16S-23S rDNA region, strain: JCM 3867 |
AB189141 |
456 |
|
930 tax ID |
* |
|
|
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Availability in culture collections External links
[Ref.: #5601] |
Culture collection no. |
DSM 14887, ATCC 19377, JCM 3867, NCIMB 8343, CIP 104597, IAM 12134 |
[Ref.: #69808] |
SI-ID 45621
|
* |
|
Literature: |
Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries. |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Enzymology |
Detection of Acidithiobacillus ferrooxidans in acid mine drainage environments using fluorescent in situ hybridization (FISH). |
Mahmoud KK, Leduc LG, Ferroni GD |
J Microbiol Methods |
10.1016/j.mimet.2004.10.022 |
2005 |
* |
Metabolism |
New Insights Into Acidithiobacillus thiooxidans Sulfur Metabolism Through Coupled Gene Expression, Solution Chemistry, Microscopy, and Spectroscopy Analyses. |
Camacho D, Frazao R, Fouillen A, Nanci A, Lang BF, Apte SC, Baron C, Warren LA |
Front Microbiol |
10.3389/fmicb.2020.00411 |
2020 |
* |
Genetics |
A new genome of Acidithiobacillus thiooxidans provides insights into adaptation to a bioleaching environment. |
Travisany D, Cortes MP, Latorre M, Di Genova A, Budinich M, Bobadilla-Fazzini RA, Parada P, Gonzalez M, Maass A |
Res Microbiol |
10.1016/j.resmic.2014.08.004 |
2014 |
* |
Enzymology |
A versatile and efficient markerless gene disruption system for Acidithiobacillus thiooxidans: application for characterizing a copper tolerance related multicopper oxidase gene. |
Wen Q, Liu X, Wang H, Lin J |
Environ Microbiol |
10.1111/1462-2920.12494 |
2014 |
* |
Genetics |
Draft genome sequence of the extremely acidophilic biomining bacterium Acidithiobacillus thiooxidans ATCC 19377 provides insights into the evolution of the Acidithiobacillus genus. |
Valdes J, Ossandon F, Quatrini R, Dopson M, Holmes DS |
J Bacteriol |
10.1128/JB.06281-11 |
2011 |
* |
Phylogeny |
Differentiation of Acidithiobacillus ferrooxidans and A. thiooxidans strains based on 16S-23S rDNA spacer polymorphism analysis. |
Bergamo RF, Novo MT, Verissimo RV, Paulino LC, Stoppe NC, Sato MI, Manfio GP, Prado PI, Garcia O Jr, Ottoboni LM |
Res Microbiol |
10.1016/j.resmic.2004.03.009 |
2004 |
* |
Phylogeny |
Physiology and taxonomy of thiobacillus strain TJ330, which oxidizes carbon disulphide (CS2). |
Hartikainen T, Ruuskanen J, Raty K, Von Wright A, Martikainen PJ |
J Appl Microbiol |
10.1046/j.1365-2672.2000.01150.x |
2000 |
* |
Metabolism |
Organic layer characteristics and microbial utilization of the biosulfur globules produced by haloalkaliphilic Thioalkalivibrio versutus D301 during biological desulfurization. |
Liu Z, Yang M, Mu T, Liu J, Chen L, Miao D, Xing J |
Extremophiles |
10.1007/s00792-022-01274-z |
2022 |
* |
|
Sticky Bacteria: Understanding the Behavior of a D-Galactose Adapted Consortium of Acidophilic Chemolithotroph Bacteria and Their Attachment on a Concentrate of Polymetallic Mineral. |
Aguirre P, Saavedra A, Moncayo E, Hedrich S, Guerrero K, Gentina JC |
Front Microbiol |
10.3389/fmicb.2021.767639 |
2021 |
* |
|
Bioaugmentation with Acidithiobacillus species accelerates mineral weathering and formation of secondary mineral cements for hardpan development in sulfidic Pb-Zn tailings. |
Liu Y, Wu S, Southam G, Chan TS, Lu YR, Paterson DJ, Huang L |
J Hazard Mater |
10.1016/j.jhazmat.2020.124988 |
2021 |
* |
|
- References
-
#5601 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 14887
|
-
-
-
#35699 |
; Curators of the CIP;
|
-
-
#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
|
-
#68382 |
Automatically annotated from API zym .
|
-
#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
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-
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#69808 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID45621.1 )
|
-
#123524 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 104597
|
- * These data were automatically processed and therefore are not curated
Change proposal
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