Name: Neisseria mucosa N 16 1959
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 10469

Type strain:

Species: Neisseria mucosa

Strain Designation: N 16 1959

Culture col. no.: DSM 17611, ATCC 19696, CIP 59.51, NCTC 12978, CCUG 26877, JCM 12992

Strain history: CIP <- 1959, M. Véron, Necker Hosp., Paris, France: strain N 16 1959

NCBI tax ID(s): 488 (species)

SI-ID 37075

ATCC 19696, CIP 5951, CCUG 26877, NCTC 12978, CIP 59.51, BCRC 10716, CCRC 10716, JCM 12992, DSM 17611

Other strains from Neisseria mucosa

N. mucosa X 34, CIP 59.47, ATCC 19693
N. mucosa X 68, CIP 59.48, ATCC 19694
N. mucosa X 71, CIP 59.49, ATCC 19695
N. mucosa Pat, CIP 59.50, ATCC 19697
N. mucosa M3, CIP 73.14, ATCC 25999, NCTC ...
N. mucosa AmMS 138, CIP 104058, ATCC 49233
N. mucosa CIP 59.55, NCTC 4590
N. mucosa CCUG 795, NCDC B4509
N. mucosa CCUG 804
N. mucosa CCUG 805
N. mucosa CCUG 10421
N. mucosa CCUG 12106
N. mucosa CCUG 12285
N. mucosa CCUG 12673
N. mucosa CCUG 15084
N. mucosa CCUG 17327
N. mucosa CCUG 20483
N. mucosa CCUG 24677 B
N. mucosa CCUG 24737
N. mucosa CCUG 26783
N. mucosa CCUG 28979
N. mucosa CCUG 29748
N. mucosa CCUG 30166 A
N. mucosa CCUG 30166 B
N. mucosa CCUG 30321
N. mucosa CCUG 31685
N. mucosa CCUG 32663
N. mucosa CCUG 33613
N. mucosa CCUG 34798
N. mucosa CCUG 35064
N. mucosa CCUG 39006
N. mucosa CCUG 41480
N. mucosa CCUG 42307
N. mucosa CCUG 43177
N. mucosa CCUG 44774
N. mucosa CCUG 44849
N. mucosa CCUG 48804
N. mucosa CCUG 59115
N. mucosa CCUG 65884

Section

Neisseria mucosa N 16 1959 is a microaerophile, mesophilic, Gram-negative bacterium that was isolated from sputum from a patient with bronchitis and nephrititis.

Gram-negative
mesophilic
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Neisseriales*
	Family	*Neisseriaceae*
	Genus	*Neisseria*
	Species	**Neisseria mucosa**
	Full Scientific Name (LPSN)	Neisseria mucosa Véron et al. 1959 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.996

[Ref.: #7084]

Incubation period

1-2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7084]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #7084]

Culture medium growth

[Ref.: #7084]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7084]

Culture medium composition

expand / minimize

[Ref.: #37603]

Culture medium

MEDIUM 6 - Columbia agar with 10 % horse blood

[Ref.: #37603]

Culture medium growth

[Ref.: #37603]

Culture medium composition

expand / minimize

[Ref.: #121160]

Culture medium

CIP Medium 6

[Ref.: #121160]

Culture medium growth

[Ref.: #121160]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #7084]	growth	30 °C
[Ref.: #37603]	growth	30 °C
[Ref.: #48586]	growth	30-37 °C
[Ref.: #67770]	growth	30 °C

[Ref.: #7084]	Temperature range	mesophilic
[Ref.: #37603]	Temperature range	mesophilic
[Ref.: #48586]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #48586]

Oxygen tolerance

microaerophile

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %100

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68377]	D-fructose ChEBI	+	builds acid from	* from API NH
[Ref.: #68377]	D-glucose ChEBI	+	builds acid from	* from API NH
[Ref.: #68377]	maltose ChEBI	+	builds acid from	* from API NH
[Ref.: #68377]	ornithine ChEBI	-	degradation	* from API NH
[Ref.: #68377]	tryptophan ChEBI	-	energy source	* from API NH
[Ref.: #68377]	urea ChEBI	-	hydrolysis	* from API NH

	Metabolite production	Metabolite	Production
[Ref.: #68377]		indole ChEBI	no	* from API NH

	Physiological tests	Metabolite	Indole test
[Ref.: #68377]		indole ChEBI	-	* from API NH

	Enzyme	Enzyme activity	EC number
[Ref.: #68377]	alkaline phosphatase	-	3.1.3.1	* from API NH
[Ref.: #68377]	lipase	-		* from API NH
[Ref.: #68377]	ornithine decarboxylase	-	4.1.1.17	* from API NH
[Ref.: #68377]	proline-arylamidase	+	3.4.11.5	* from API NH
[Ref.: #68377]	tryptophan deaminase	-	4.1.99.1	* from API NH
[Ref.: #68377]	urease	-	3.5.1.5	* from API NH

API® NH:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Penicillinase productionPEN	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from maltoseMAL	Acid from sucroseSAC	Ornithine decarboxylaseODC	Urease/urea hydrolysisURE	LipaseLIP	Alkaline phosphatasePAL	beta-Galactosidasebeta GAL	Proline arylamidaseProA	gamma-Glutamyl transferaseGGT	Indole productionIND
[Ref.: #7084]	6098	+	+	+	+	-	-	-	-	-	+	+	-	-
[Ref.: #7084]	5918	-	+	+	+	+	-	-	-	-	-	+	+	-
[Ref.: #7084]	5775	-	+	+	+	+	-	-	-	-	-	+	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7084]	Sample type/isolated from	sputum from a patient with bronchitis and nephrititis
[Ref.: #7084]	Country	France
[Ref.: #7084]	Country ISO 3 Code	FRA
[Ref.: #7084]	Continent	Europe

[Ref.: #48586]	Sample type/isolated from	Human sputum,chronic bronchitis

[Ref.: #67770]	Sample type/isolated from	Human sputum, chronic bronchitis

[Ref.: #121160]	Sample type/isolated from	Human, Sputum, bronchitis and nephrititis
* marker position based on {}

Isolation sources categories

#Infection	#Disease	-
#Infection	#Inflammation	-
#Infection	#Patient	-
#Host Body Product	#Fluids	#Sputum

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HF558371 (>99% sequence identity) for Neisseria from Microbeatlas

Aquatic Samples	644
Soil Samples	433
Animal Samples	20175
Plant Samples	271
Total Samples	21523

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7084]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #121160]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Neisseria mucosa partial 16S rRNA gene, strain N16	HF558371	1501	ENA	488 tax ID
[Ref.: #67770]	Neisseria mucosa gene for 16S ribosomal RNA, partial sequence	AB910739	1502	ENA	488 tax ID
[Ref.: #7084]	Neisseria mucosa partial 16S rRNA gene, type strain DSM 17611T	HG005351	1537	ENA	488 tax ID
[Ref.: #20218]	Neisseria mucosa 16S rRNA gene, partial	AJ247257	457	ENA	488 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Neisseria mucosa ATCC 19696	GCA_003028315	complete	GenBank	488 tax ID	*
[Ref.: #66792]	Neisseria mucosa strain ATCC 19696	488.19	complete	PATRIC	488 tax ID	*
[Ref.: #66792]	Neisseria mucosa ATCC 19696	2874897852	complete	JGI IMG/M	488 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Neisseria mucosa ATCC 19696 NCBI: GCA_003028315.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Neisseria mucosa ATCC 19696 NCBI: GCA_003028315.1
[Ref.: #69480]	flagellated	no	92.612	no
[Ref.: #69480]	gram-positive	no	98.134	no
[Ref.: #69480]	anaerobic	no	98.408	no
[Ref.: #69480]	halophile	no	75.922	no
[Ref.: #69480]	spore-forming	no	96.656	no
[Ref.: #69480]	glucose-util	yes	69.479	no
[Ref.: #69480]	aerobic	no	93.939	no
[Ref.: #69480]	thermophile	no	99.349	yes
[Ref.: #69480]	motile	no	87.256	no
[Ref.: #69480]	glucose-ferment	no	85.958	no

Availability in culture collections External links

[Ref.: #7084]

Culture collection no.

DSM 17611, ATCC 19696, CIP 59.51, NCTC 12978, CCUG 26877, JCM 12992

[Ref.: #79746]

SI-ID 37075

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Diagnostics of neisseriaceae and moraxellaceae by ribosomal DNA sequencing: ribosomal differentiation of medical microorganisms.	Harmsen D, Singer C, Rothganger J, Tonjum T, de Hoog GS, Shah H, Albert J, Frosch M	J Clin Microbiol	10.1128/JCM.39.3.936-942.2001	2001	*

References

#7084

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17611

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#37603 ; Curators of the CIP;
#48586 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 26877

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68377

Automatically annotated from API NH .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#79746

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID37075.1 )

#121160 Collection of Institut Pasteur ; Curators of the CIP; CIP 59.51
* These data were automatically processed and therefore are not curated

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Neisseria mucosa ATCC 19696

Neisseria mucosa ATCC 19696

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